Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3625 ATGTCGAGAAAAAATCTCTTAATATTCCTCTTCTATGTCCTTGTGAAACTCTCTTGTGTGGCTTTAGCTGCAAGTGATGAGAAGAATGAAGAAGCAAATGCACTCTTAAAGTGGAAGACCACCCTTGATAACAAAAGCCAACTTATCTTGTCATCTTGGAACAACGGCACAAGTCCATGCAGATGGAAAGGAATTCAGTGTGACAAATCAAAGTCAATCACAACCATGAACATTGAAAACTTTGGACTCAAAGGTACATTCCACACTCTCACCTTCTCTTCATTCCCAAACCTCCTCAGCATAAACATATACAACAACTTGTTCCATGGAACCATTCCCCCGCAGATTGGTAACTTGTCAAGAGTTAATCAATTGAACTTGTCCAAAAATTTCTTTGAAGGTTCCATTCCTAAAGAGATCTTCACCTTGACAAGTCTCCACGGGCTTGATCTTTTCGAATGCCATCTAAGTGGCCAAATCCCTGAGTCTATAGGAAATTTGGCCAACTTAACATATCTAGATTTTGGAGACAACAATTTTTCTGGCCACATTCCTACTGGGATTGGCAAATTGGTCAACCTTGAGTATCTTTCTTTCATAGATAATTATCATCTTTCTGGTTCCATTCCAGTGGAAATAGGAATGATGACAAACCTTCATGTGATTGATTTCTCAAGCAACACTCTCTTTGGGGCTATCCCTCCTACCATTGGTAACTTGAGCAATTTGCAACAATTATACCTTTCTAGTAACACACTCTCTGGGTCAATTCCACCCTCCATCTGGAACATGTCTAACTTGACCTTATTATATCTTAATAACAATAACCTTTCCGGATCCATCCCTGCTTCCATAGAAAACTACTTAGCCAACTTAGATTCCCTTGCACTTGATAACAATCACTTTTCTGGATCCATTCCTTCCACATTGGGAAACTTGACAAAGCTCTTCCAATTATACCTCAGCTTTAATCATTTTTCTGGACCAATTCCTGCCTCTATAGGTAATCTGGTCAATTTGAATTACTTGAGCTTCCATACAAACAACCTCTCTGGAACTGTCCCTGAAACAATTGGAAACCTGAAAGGCCTCAAGATGCTAGAATTGGCCACCAACAAGTTTAATGGCACCCTTCCACAGGGCATTAATAACTTGACAAGTTTGAGGAAATTTTCAGTGTCCAAGAACAATTTCATTGGCCATTTGCCAACTCAAATCTGCTCAGGTGGATTACTCTCATACTTCAATGCTGAGAACAACCATTTTACTGGATCAGTGCCAAGAAGCTTGAAGAGTTGCTCTAACATTGCTAGACTCACATTACAGGGAAACCAGTTGGAAGGTGACATTGCAGAAATTTTCGGCATATATCCGAATTTAGTACATATTGATCTGAGTGATAACAAGTTTTACGGTCAGATTTCACCAAACTGGGGAAAGAACCATAACCTTCAGAACTTGTACATGTCCAACAACAATATTTCTGGTGCTATACCACCACAAATTGTTGAGGCTACTAATCTGGGTAGGCTTCGCCTTTCTTCAAACCAACTGAATGGAAAGATTCCAAAGGAACTAGGGAATATGAAAAACTTGTTTGAACTCAGTATCAATAACAATCATCTCTCAGGAAGCATTCCACCAGAAATAGGATCATTGAAGAATCTGACATTCTTGCGCCTAGCAGGAAATGAGTTGAGTGGCAACATACCAAGAGAAGTTATGCAGTTACCCAAATTGGTTGAATTGAACTTGAGCATCAACAGACTAGAGGGAAGCATCCCCTCTGGCATTGCCTCATTAGAACCTCTCTCTTCTCTTGATCTTAGCAACAATTTGTTGAATGGAACAATACCAAGGTGGCTTGGAGATCTGACGCAATTGAACTTCTTGAACCTCTCACACAATGATCTCTCTGGCAATATTCCATCCAGTTTTGATGGCATGTCAGCCTTGATTTCAGTCAACATATCACACAACCAGTTAGAAGGGCCGCTTCCAAACAATCAAGCGTTTCTTAATGCTCCAATTTGGTCCTTGAAAAGTAACAAAGGCTTGTGTGCTAACAATGTCACCGGCTTGGAGCGATGCACAAAGAAGCATAGCCTGAAGATGGTATTGTTTCTTATCTATGGAGCACTTGCTCTAGCACTTTGTTTGTTAGGTGTTTCAATGTATATTCTTTGCAGAAGAGGCAGAAAGAGAGAAGAAGTTAAAGAAGTGCAATCAAAAGAGCACTTTTCCATATGGAGCCATGATGGGAAAATGGCATTTGAAACAATCATTCAAGCTACCAATAATTTTGATGACAAATATCTCATTGGAAATGGAGGGCAAGGATCTATTTACAAGGCTGAGTTGCCTTCAGGTATGGTTGTTGCTGTGAAGAAGCTTCATGAGAAGACTACTATTGGGGAGGAGACATACAATTTGAAAGCATTTGAGAATGAAATCAAAGCATTGACAGAAATGAAGCACCGCAACATCATAAAGCTATATGGGTTTTGCCAACATTCACGGTTCTCATTTTTGGTTTATAAGTACTTGGAAGGTGGAAGCTTGGATCAAGTGCTAAGAGATGAAGCGAAAGCAAGTAAATTTGATTGGGGAAAGAGGGTGAATGTGATTAAAGGAGTTGCTAATGCTCTATCATATATGCATCATGATTGCTTACCTCCTATAGTTCATCGCGACATATCGAGCAAGAATGTCCTTTTGGATTCAGAATATGAAGCTCATGTCTCTGATTTTGGGACAGCTAAGTTTCTTAAGCCAGGTTCAAGTTGGACAACACTTGTAGTCACCTATGGATATGGAGCTCCTGAGCTAGCTCAGACTATGGAAGTGACAGAGAAAAGTGATGTATATAGCTTTGGAGTGCTTTGTTTGGAGATCCTCATGGGAAAGCATCCAGGAGATTTGATCAACTCATTGTTGTCGCCAACAACAGCATCAATAACATACAATTTGTTATTGGTTGATGTCATGGATCAGAGGCCACCCCATCCTAAGAATTCAATTGTTGGGGAAATCATGTGGATCACAAAGTGGGCACTTGAGTGCTTGAGACAAAGTCCACGATCACGACCAAGCATGCATCAGATTTCTAAAGAGCTTATGATGGGAAAGTCACCTTTAGCTAATCGCCAGTTTCCTATGATCAGAATTGGGCAACTCATTGAAGAAGGATCGGGGAGTGCACTTACGTGA 3210 0.4025 MSRKNLLIFLFYVLVKLSCVALAASDEKNEEANALLKWKTTLDNKSQLILSSWNNGTSPCRWKGIQCDKSKSITTMNIENFGLKGTFHTLTFSSFPNLLSINIYNNLFHGTIPPQIGNLSRVNQLNLSKNFFEGSIPKEIFTLTSLHGLDLFECHLSGQIPESIGNLANLTYLDFGDNNFSGHIPTGIGKLVNLEYLSFIDNYHLSGSIPVEIGMMTNLHVIDFSSNTLFGAIPPTIGNLSNLQQLYLSSNTLSGSIPPSIWNMSNLTLLYLNNNNLSGSIPASIENYLANLDSLALDNNHFSGSIPSTLGNLTKLFQLYLSFNHFSGPIPASIGNLVNLNYLSFHTNNLSGTVPETIGNLKGLKMLELATNKFNGTLPQGINNLTSLRKFSVSKNNFIGHLPTQICSGGLLSYFNAENNHFTGSVPRSLKSCSNIARLTLQGNQLEGDIAEIFGIYPNLVHIDLSDNKFYGQISPNWGKNHNLQNLYMSNNNISGAIPPQIVEATNLGRLRLSSNQLNGKIPKELGNMKNLFELSINNNHLSGSIPPEIGSLKNLTFLRLAGNELSGNIPREVMQLPKLVELNLSINRLEGSIPSGIASLEPLSSLDLSNNLLNGTIPRWLGDLTQLNFLNLSHNDLSGNIPSSFDGMSALISVNISHNQLEGPLPNNQAFLNAPIWSLKSNKGLCANNVTGLERCTKKHSLKMVLFLIYGALALALCLLGVSMYILCRRGRKREEVKEVQSKEHFSIWSHDGKMAFETIIQATNNFDDKYLIGNGGQGSIYKAELPSGMVVAVKKLHEKTTIGEETYNLKAFENEIKALTEMKHRNIIKLYGFCQHSRFSFLVYKYLEGGSLDQVLRDEAKASKFDWGKRVNVIKGVANALSYMHHDCLPPIVHRDISSKNVLLDSEYEAHVSDFGTAKFLKPGSSWTTLVVTYGYGAPELAQTMEVTEKSDVYSFGVLCLEILMGKHPGDLINSLLSPTTASITYNLLLVDVMDQRPPHPKNSIVGEIMWITKWALECLRQSPRSRPSMHQISKELMMGKSPLANRQFPMIRIGQLIEEGSGSALT* 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3625 1069 SUPERFAMILY RNI-like 76 375 - -
Amo14g3625 1069 Gene3D Ribonuclease Inhibitor 186 288 IPR032675 -
Amo14g3625 1069 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Amo14g3625 1069 SUPERFAMILY RNI-like 354 665 - -
Amo14g3625 1069 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Amo14g3625 1069 Pfam Protein kinase domain 770 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3625 1069 ProSiteProfiles Protein kinase domain profile. 768 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3625 1069 Gene3D Ribonuclease Inhibitor 360 700 IPR032675 -
Amo14g3625 1069 PANTHER LRR RECEPTOR-LIKE KINASE 244 1059 - -
Amo14g3625 1069 PANTHER LRR RECEPTOR-LIKE KINASE 11 172 - -
Amo14g3625 1069 PANTHER LRR RECEPTOR-LIKE KINASE 157 258 - -
Amo14g3625 1069 ProSitePatterns Tyrosine protein kinases specific active-site signature. 894 906 IPR008266 GO:0004672|GO:0006468
Amo14g3625 1069 SUPERFAMILY Protein kinase-like (PK-like) 751 1039 IPR011009 -
Amo14g3625 1069 Gene3D Transferase(Phosphotransferase) domain 1 849 1050 - -
Amo14g3625 1069 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 172 - -
Amo14g3625 1069 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 244 1059 - -
Amo14g3625 1069 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 157 258 - -
Amo14g3625 1069 Gene3D Phosphorylase Kinase; domain 1 729 848 - -
Amo14g3625 1069 Pfam Leucine rich repeat 578 638 IPR001611 GO:0005515
Amo14g3625 1069 Pfam Leucine rich repeat 218 277 IPR001611 GO:0005515
Amo14g3625 1069 SMART LRR_typ_2 577 601 IPR003591 -
Amo14g3625 1069 SMART LRR_typ_2 240 263 IPR003591 -
Amo14g3625 1069 SMART LRR_typ_2 625 648 IPR003591 -
Amo14g3625 1069 SMART LRR_typ_2 289 313 IPR003591 -
Amo14g3625 1069 SMART LRR_typ_2 167 191 IPR003591 -
Amo14g3625 1069 SMART LRR_typ_2 529 553 IPR003591 -
Amo14g3625 1069 SMART LRR_typ_2 385 409 IPR003591 -
Amo14g3625 1069 SMART LRR_typ_2 119 143 IPR003591 -
Amo14g3625 1069 SMART LRR_typ_2 337 361 IPR003591 -
Amo14g3625 1069 SMART LRR_typ_2 264 288 IPR003591 -
Amo14g3625 1069 Gene3D Ribonuclease Inhibitor 289 359 IPR032675 -
Amo14g3625 1069 PRINTS Leucine-rich repeat signature 604 617 - -
Amo14g3625 1069 PRINTS Leucine-rich repeat signature 625 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3625 Amo-Chr14 140760021 140763316 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3625 7 941 Receptor kinase-like Gene Family AT4G08850 44.491 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo14g3625 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3625 - - gmx:100815688 1320.84