Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3614 ATGGAAGAGAAATTTGATTTAGTAACTGATGTGAATCCAAAAAAGCTTCAATGGCATTTCAAAGTGTATGTTGTTAGGATATGGGAGTTCCAAGCAAATACAATGAGAAAGAGATTGGGTGGTAGAATCCATTGCACTATTCCCCGGGGGTTGGTAAAAAAATGGCGTGGTGCCATTCTTGAGTTTCAGATGTACACAATGACTAATTTTATTGTGTTCGACCACAAGTATAAGAAGAATGGTGTGAGTAGGATGGTATTGACATTCTCCCAGAGGACTTTGGTCAATCATGTTAAGAAGCCAAGCTTTCCCCTTGAGGCTTTCTACCTTAAGTCTTATGTAGATCTTCTAACTGCTGACAAATTACCAGATTCTGAAATGTTTGATTTGATCGGAGAGGTTGTTAGTAAGGAAGATCCTAGGGACTTGATCACTAGCAAAGGGAAGGAGACTAAGCGATTGGTTATCATCCTTCAAGACCTCGAGATCAATTGCATTTTGTTTGGTGAGTTGGTTGACCATCTCCTACCGCACCTTGAAGAGGAGAGAGCTGAACCACTTATTGTTGTGCTGCAATATTTTAAGGCAACAAGGTGGAATGGGAAAACATCGGTGCAAAGCAACTTTAAAATCTCGAAGGTCCATATTAATCCTGAATTAACAAAAGTCATCCAATTCAAGAGCAAGTTAAGTAGTCCTGCCGCATCAAATCCGACCAGGATCAGCCAGGTGTCATCTCCTAATGCTTGGTCTGCCTTGATGAGTCCCATATGGATATTAGGGACGATTGTATCCATCAATGCGGGAAATGATGATTGGTTTTACAAATCTTGCAGAAGGTGCCCTAAAAAAGTTGAAACCCCCATTGGAAATAGATATGAATGTGGCAAGTGCGGACACACACACGGAACAGCGGCTCTTAGGTACAAATTAGAGGTAACAGTGCACGATGGAACAGGGAGCATGTCACTACTCCTGTGGGATAGGGAGACCACACAGTTGTGTGGAAAGACAGTGGACAAGATTATTTGTGACAATGACCATGACTACAACAACTTGGTTGACATTTCAGGCATTGTGGTCAATCTTACGAGTGATACTGATACTCATCTTACTATGGATTCTGCTGAGGAAAGTGTTTCTAGCCTCAAGTTCAAAACACTAACTAAGAGAACTACCAGCGGTGTAAAAATTGGCAACATCAATGTTAACCTGATTGAGGAGGAAGGACAAAACTCTACTAATAGGCTCAGGAGCAAGGGGACGAAGAAGCTAAAATCTCAGGTTAATGATTCTGATGTTTAA 1305 0.413 MEEKFDLVTDVNPKKLQWHFKVYVVRIWEFQANTMRKRLGGRIHCTIPRGLVKKWRGAILEFQMYTMTNFIVFDHKYKKNGVSRMVLTFSQRTLVNHVKKPSFPLEAFYLKSYVDLLTADKLPDSEMFDLIGEVVSKEDPRDLITSKGKETKRLVIILQDLEINCILFGELVDHLLPHLEEERAEPLIVVLQYFKATRWNGKTSVQSNFKISKVHINPELTKVIQFKSKLSSPAASNPTRISQVSSPNAWSALMSPIWILGTIVSINAGNDDWFYKSCRRCPKKVETPIGNRYECGKCGHTHGTAALRYKLEVTVHDGTGSMSLLLWDRETTQLCGKTVDKIICDNDHDYNNLVDISGIVVNLTSDTDTHLTMDSAEESVSSLKFKTLTKRTTSGVKIGNINVNLIEEEGQNSTNRLRSKGTKKLKSQVNDSDV* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3614 434 Gene3D - 231 394 IPR012340 -
Amo14g3614 434 SUPERFAMILY Nucleic acid-binding proteins 124 231 IPR012340 -
Amo14g3614 434 Gene3D - 108 230 IPR012340 -
Amo14g3614 434 Pfam Replication factor-A C terminal domain 261 351 IPR013955 -
Amo14g3614 434 MobiDBLite consensus disorder prediction 412 434 - -
Amo14g3614 434 CDD RPA1_DBD_B_like 129 228 - -
Amo14g3614 434 SUPERFAMILY Nucleic acid-binding proteins 257 352 IPR012340 -
Amo14g3614 434 PANTHER REPLICATION FACTOR A 1, RFA1 73 331 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Amo14g3614 434 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 73 331 - -
Amo14g3614 434 CDD RPA1_DBD_C 241 356 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3614 Amo-Chr14 140542966 140545435 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3614 102 320 Core DNA Replication Machinery Family AT2G06510 23.200 8.27e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3614 - - aip:107607840 592.808