Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3602 ATGGAATCCAAATTGGGACCACGAAATCCTATTCGCTGTGCTCAATACCGTCAATTATTTCACCAAGCTCCACCACTAGCTCTTTCCCCACCAATGCCACCACCGCCACGACCTTTTTCTCCTGCCCCTCCGCCTCCTCAAACTCCCCTGCCGACGAAACCTTCCTCTAAACCAACCCAGGTACTGCATTTTCCTCCTCCAACTTCAACTCCAGTATCATCTTTTTCGTCAAGCGGCCTCATCGTTGGAATGGCGGCAGCAGTCACTTTCGCCATTTTGATTGTGGTACTTAGCGCTTTTGGCATTTTTTATTGGAAGAATAGAAAGAGAGAACATGATAAGGGGCTCAGACTTAAAGGCAATAACGGAATAATAGAAATCTCCTCAAAGAACAGAATATTCAGATACGAGGAGTTGGAAGTTGCAACAGATGGATTCTCCAAAGCAAATTTGCTTGGAGAAGGTGGATTTGGTTATGTCCACAAAGGAGTTCTTCCAAACGGCAAGGAGGCTGCCATCAAACAGCTCAAGGATGGAAGTAGGCAGGGAGAGCGTGAATTCCAAGCTGAAGTAGACATAATCACTAGGATTCATCACAGGAATCTCGTTTCTTTGCTTGGATATTGCATCGCCGGCCACCATAGACTTCTCGTCTACAAATTTGTTCCAAACAATACATTAGAGTTCCATCTACATGGGCAAGGTCCTACTGTAGATTGGCCTACAAGAATGAGGATTGCTCTAGGAGCTGCTAAGGGATTAGCATATCTTCATGAGGAATGTTATCCCAAGATCATCCATCGTGATATCAAAGCTGCTAACATTCTCCTCGATTTTAATTTCCAAGCGAAGGTTGCTGATTTTGGGCTTGCAAAGTTTTGCCCAGATATGAATACGCACGTGTCCACTCGAGTGATGGGAACTCTAGGGTATGTGGCCCCTGAATATGCTTCCAGTGGAAACCTCACTGAAAAAGCCGACGTTTTCTCCTTTGGAGTCATGCTTCTTGAGTTAATTACTGGCCGCCGACCAATAATTAATTCACATCATACTTTCATGGAGGCAATGCCTTTGCTAACAAAGGTTTTGAAAGAGAATAATTTTGAAGTTGTAGCTGACCAAAAGCTCCAAAATCAGTATGAACCAACCGAAATGGTTTCCATGCTGGCTTCTGCAGCTGCTTCTATACGATATGAAGCAAAGCTTCGACCAAAGATGAGCCAGATAGTTCGTGCTTTGGAAGGAGATGCATCTCAAGTAGCTGAGTTCACTTCTAATGTATTATGCTTAGATTCCGAGGCTGCTAGATACCGACGAGAAATGATCAAAATCATTAGTGACATGAGTGGATCCACGAGTTAA 1362 0.4405 MESKLGPRNPIRCAQYRQLFHQAPPLALSPPMPPPPRPFSPAPPPPQTPLPTKPSSKPTQVLHFPPPTSTPVSSFSSSGLIVGMAAAVTFAILIVVLSAFGIFYWKNRKREHDKGLRLKGNNGIIEISSKNRIFRYEELEVATDGFSKANLLGEGGFGYVHKGVLPNGKEAAIKQLKDGSRQGEREFQAEVDIITRIHHRNLVSLLGYCIAGHHRLLVYKFVPNNTLEFHLHGQGPTVDWPTRMRIALGAAKGLAYLHEECYPKIIHRDIKAANILLDFNFQAKVADFGLAKFCPDMNTHVSTRVMGTLGYVAPEYASSGNLTEKADVFSFGVMLLELITGRRPIINSHHTFMEAMPLLTKVLKENNFEVVADQKLQNQYEPTEMVSMLASAAASIRYEAKLRPKMSQIVRALEGDASQVAEFTSNVLCLDSEAARYRREMIKIISDMSGSTS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3602 453 SUPERFAMILY Protein kinase-like (PK-like) 124 413 IPR011009 -
Amo14g3602 453 Gene3D Transferase(Phosphotransferase) domain 1 222 430 - -
Amo14g3602 453 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 125 418 - -
Amo14g3602 453 ProSitePatterns Protein kinases ATP-binding region signature. 152 174 IPR017441 GO:0005524
Amo14g3602 453 ProSiteProfiles Protein kinase domain profile. 146 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3602 453 MobiDBLite consensus disorder prediction 26 53 - -
Amo14g3602 453 CDD STKc_IRAK 152 415 - -
Amo14g3602 453 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 125 418 - -
Amo14g3602 453 MobiDBLite consensus disorder prediction 24 68 - -
Amo14g3602 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Amo14g3602 453 SMART serkin_6 146 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3602 453 Pfam Protein tyrosine and serine/threonine kinase 149 413 IPR001245 GO:0004672|GO:0006468
Amo14g3602 453 Gene3D Phosphorylase Kinase; domain 1 109 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3602 Amo-Chr14 140284019 140291244 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3602 115 433 Trihelix Transcription Factor Family AT4G32710 59.819 3.66e-125 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Amo14g3602 PK_Tyr_Ser-Thr 7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3602 - - ahf:112743291 789.645