Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3597 ATGGCATCCGAATTCGGACCACCAAATCCAATTCCCTGTGCTCAATACGGTCAATTCTTTCAACCATTCTTTCAACAAAATCCCAACTTTTGTCTAATAGTAGGATGTGATTGTTCCAGTTCTTCTTTAGTTTTTCCTCCTCTTTCATCTCCATCGTTTTTGTCATTGCCACCATCATCATTATCTCCTCTTCTACCATTATTGCTACCACCGTCATCATCACTAGCTCTTTCCCCACCAATATTACTACCACCACCACTTTTTTCTCCTGCCTCTACGCCTCCTCAAACTCTCCTGCCAACGAAACCTTCCTCTAAACCAACCCAGGTACTGAATTTTTCTCCTCCAACTTCAACTCCAGCATCATCTTTTTCGTCAAGCGGCCTCATCATTGAAATGGCAGCAACAGTCACTTTTGCCATTTTGATTGTGGTGCTTAGCGCTTTTGGCAATAACGGAATAATAGAAATCTCCTCAAAGAACAGAATATTCAGATACGAGGAGTTGGCAGTTGCAACAGATGGATTCTCGAAAGCGAATTTGCTTGGAGAAGGTGGATTCGGTTATGTTCACAAAGGACTCCTTCCAAACGGCAAGGAGGCTGCCATCAAACAGCTCAAGGATGGAAGTAGGCAGGGAGAGCGTGAATTTCAAGCTGAAGTAGACATAATCACTAGGGTTCATCACAGGAATCTCGTTTCTTTGCTTGGATATTGCATCGCCGACCACCATAGACTTCTCGTCTATGAATTTGTTCCAAACAATACATTAGAGTTCCATCTACATGGGCAAGGTCCTACTATAGATTGGCCTACAAGAATGAGGATTGCTCTAGGAGCTGCTAAGGGATTAACATATCTTCATGAGGAATTGATTTGTTGGTATGTTTCAAGGTTATCCTGCCAAAGATCATGCCATCGTGATATGTCAAAGGTTGCTGATTTTGGGGCTTCAAAAAGTTTTGCGCCGGATATGAATACCATGTATGTAGCTCCTGAATATGCTTCCAGTGGAAACCTCACTGAAAAAGCCGACGTTTTCTCCTTCGGAGTCATGCTTCTCGAGTTAATTACTGGCCGCCGACCAATAATTGATTCACATCATACTTTCATGGAGGCAATGCCTTTGCTAACAAAGGTTTTGAAAGAGAATAATTTTGAAGTTGTAGCTGACCAAAAGCTCCAAAATCAGTATGAACCAACCGAAATGGTTTCCATGCTGGCCTCTGCAGCTGCTTCTATACGATATGAAGCAAAGCTTCGACCAAAGATGAGCCAGATAGTTCGTGCTTTGGAAGGAGATGCATCTCAAGTAGCTGAGTTCACTTCTAATGTATTATCCTTAGATTCTGAGGCTGCTGCATACAGACGAGAAATGATTAAAATCATTTGTGACATGAGTGGATCCACGAGTTAA 1416 0.4237 MASEFGPPNPIPCAQYGQFFQPFFQQNPNFCLIVGCDCSSSSLVFPPLSSPSFLSLPPSSLSPLLPLLLPPSSSLALSPPILLPPPLFSPASTPPQTLLPTKPSSKPTQVLNFSPPTSTPASSFSSSGLIIEMAATVTFAILIVVLSAFGNNGIIEISSKNRIFRYEELAVATDGFSKANLLGEGGFGYVHKGLLPNGKEAAIKQLKDGSRQGEREFQAEVDIITRVHHRNLVSLLGYCIADHHRLLVYEFVPNNTLEFHLHGQGPTIDWPTRMRIALGAAKGLTYLHEELICWYVSRLSCQRSCHRDMSKVADFGASKSFAPDMNTMYVAPEYASSGNLTEKADVFSFGVMLLELITGRRPIIDSHHTFMEAMPLLTKVLKENNFEVVADQKLQNQYEPTEMVSMLASAAASIRYEAKLRPKMSQIVRALEGDASQVAEFTSNVLSLDSEAAAYRREMIKIICDMSGSTS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3597 471 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 151 436 - -
Amo14g3597 471 SUPERFAMILY Protein kinase-like (PK-like) 154 431 IPR011009 -
Amo14g3597 471 MobiDBLite consensus disorder prediction 93 116 - -
Amo14g3597 471 Gene3D Transferase(Phosphotransferase) domain 1 252 451 - -
Amo14g3597 471 ProSitePatterns Protein kinases ATP-binding region signature. 182 204 IPR017441 GO:0005524
Amo14g3597 471 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 151 436 - -
Amo14g3597 471 Pfam Protein tyrosine and serine/threonine kinase 179 431 IPR001245 GO:0004672|GO:0006468
Amo14g3597 471 ProSiteProfiles Protein kinase domain profile. 176 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3597 471 Gene3D Phosphorylase Kinase; domain 1 147 251 - -
Amo14g3597 471 MobiDBLite consensus disorder prediction 102 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3597 Amo-Chr14 140194364 140201250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3597 151 450 Trihelix Transcription Factor Family AT4G32710 50.898 1.00e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Amo14g3597 PK_Tyr_Ser-Thr 3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3597 - - ahf:112743291 624.394