Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3586 ATGGATTCCGATTATGAATTTCTAGAATCTGTTCAACAATACCTTCTTGGACATGATTCCAACAACACGGTTGACCTTTTTGACCATAATACCCTCCAATTTCCCTCTCACAACCCCTTACCAAACCCTAAATCCGATATACTTCAAGAACAAGAAAGAGATACAAATGAAAATGAACATGCGCCTCCAACATGGAAGCGTTATAGAGGCGTGAGGCGGCGGCCGTGGGGGAAGTTCGCCGCGGAGATAAGGGATCCGAAGAAGAACGGAGCTAGGGTTTGGCTTGGAACTTATGAGAAGGAAGAAGAAGCTGCTTTGGCATATGATAGAGCTGCTTTTAAATTGCGTGCATTACAAAAAAACATGGCTTCCATCACCATTATGGATTCATCAGAATCTGCATACTTAGAATACATTCAACAATACCTTCTTGAGAATGATTCAATCATTTTTACCAATGATCTCAAAATGGATGATTCTAAATCATGTCAAGCTGGTTCAAACCCTAATTGCGATAGCATTTCCGATACAACTTCTCATAGTGAGAGTCCTACCGGTGCCTCGGCAGGGCGTGAAGTGCACGCGCCTCCGACATGGAAGCGTTATAGGGGTGTGAGGCGTAGGCCGTGGGGGAAGTTTGCCGCGGAGATTAGGGATCCAAAGAAAAATGGGGCTAGGGTTTGGCTCGGAACTTATGAGACTGAAGAGAAAGCGGCTATAGCATATGATAAAGCCGCTTTTAAAATGCGCGGCCGAAAAGCCAAGTTGAATTTCCCTCATCTCATTGGCTCAGACGAAAAATCTGTCTCATCGTCTGAGCTCTCGTCTGAGCCAGTGATAGTGTCCGCTGTGAAACGGATTTCTCCAGAACCTTGTTTGCCATCCTCGCCTTCATCGGAGGATGATTCGAACTCGCCGGGGTCAAAGAGGAGGAGGAACCTAGCGGATTTACTGAATAAGATAGCCAAGAATAGAAACCAAACTAATAAGGTGGTTAAAATGGATCCAGAGGCAAATGTTGCTGATTATTGGTTGAATGATGAATTCAATATGATTCTATTTTTTGCTGTTGGTGTTGATGATCAAGAAGTTATTTAA 1098 0.439 MDSDYEFLESVQQYLLGHDSNNTVDLFDHNTLQFPSHNPLPNPKSDILQEQERDTNENEHAPPTWKRYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYEKEEEAALAYDRAAFKLRALQKNMASITIMDSSESAYLEYIQQYLLENDSIIFTNDLKMDDSKSCQAGSNPNCDSISDTTSHSESPTGASAGREVHAPPTWKRYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETEEKAAIAYDKAAFKMRGRKAKLNFPHLIGSDEKSVSSSELSSEPVIVSAVKRISPEPCLPSSPSSEDDSNSPGSKRRRNLADLLNKIAKNRNQTNKVVKMDPEANVADYWLNDEFNMILFFAVGVDDQEVI* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3586 365 PRINTS Ethylene responsive element binding protein signature 241 261 IPR001471 GO:0003700|GO:0006355
Amo14g3586 365 PRINTS Ethylene responsive element binding protein signature 202 213 IPR001471 GO:0003700|GO:0006355
Amo14g3586 365 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 129 327 - -
Amo14g3586 365 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 2 117 - -
Amo14g3586 365 SUPERFAMILY DNA-binding domain 201 260 IPR016177 GO:0003677
Amo14g3586 365 Gene3D AP2/ERF domain 200 260 IPR036955 GO:0003700|GO:0006355
Amo14g3586 365 Gene3D AP2/ERF domain 66 123 IPR036955 GO:0003700|GO:0006355
Amo14g3586 365 MobiDBLite consensus disorder prediction 161 193 - -
Amo14g3586 365 PANTHER DNA-BINDING DOMAIN 129 327 IPR044808 GO:0003700|GO:0009873
Amo14g3586 365 PANTHER DNA-BINDING DOMAIN 2 117 IPR044808 GO:0003700|GO:0009873
Amo14g3586 365 MobiDBLite consensus disorder prediction 161 186 - -
Amo14g3586 365 ProSiteProfiles AP2/ERF domain profile. 67 126 IPR001471 GO:0003700|GO:0006355
Amo14g3586 365 MobiDBLite consensus disorder prediction 290 310 - -
Amo14g3586 365 SUPERFAMILY DNA-binding domain 67 118 IPR016177 GO:0003677
Amo14g3586 365 ProSiteProfiles AP2/ERF domain profile. 201 259 IPR001471 GO:0003700|GO:0006355
Amo14g3586 365 MobiDBLite consensus disorder prediction 47 62 - -
Amo14g3586 365 CDD AP2 200 261 IPR001471 GO:0003700|GO:0006355
Amo14g3586 365 MobiDBLite consensus disorder prediction 32 62 - -
Amo14g3586 365 Pfam AP2 domain 67 117 IPR001471 GO:0003700|GO:0006355
Amo14g3586 365 Pfam AP2 domain 201 251 IPR001471 GO:0003700|GO:0006355
Amo14g3586 365 SMART rav1_2 201 265 IPR001471 GO:0003700|GO:0006355
Amo14g3586 365 SMART rav1_2 67 132 IPR001471 GO:0003700|GO:0006355
Amo14g3586 365 CDD AP2 66 116 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3586 Amo-Chr14 139978703 139992386 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3586 155 300 AP2-EREBP Transcription Factor Family AT2G44840 49.045 1.14e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Amo14g3586 AP2 6.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3586 K09286 - gmx:102663872 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3586 14 139978703 139992386 Amo14g3586 14 139978703 139992386 ECH