Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3577 ATGGAACTTGAAGCAATTATAAGGGAACAAGTTGATCTGGAGAACATACCCATAGAGGAAGTCTTTGAAAATCTAAAATGCACAAAAGAAGGACTAACCTCTGATCAAGTGAAAGAGAGGCTAGATTTGTTTGGACACAACAAGCTTGAAGAAAAGAAGGAAAGTAAAATACTCAAGTTTTTGGGGTTTATGTGGAATCCACTGTCATGGGTCATGGAAGCTGCTGCTATCATGGCCATTGCCATGGCTCATGGAGGGGGAGAAGGTTGGGATTATCAAGATTTTACGGGCATTGTTATACTGCTACTTGTAAACTCCACAATCAGTTTCATAGAAGAAAACAATGCTGGTAATGCAGCAGCAGCACTCATGGCAAGATTGGCCCCAAAAGCAAAGGTACTCCGTGATGGAAAATGGAGCGAAGAAGATGCATCGGTGTTGGTTCCTGGAGACATAATCAGCATCAAGCTAGGTGACATCATTCCTGCCGACGCACGCCTCCTTGAAGGAGATCCTTTGAAGATCGATCAGTCTGCTCTTACTGGAGAGTCACTTCCTGTTTCAAAACATCCTGGAGATGGAGTATATTCTGGTTCAACATGCAAGCAAGGAGAAATTGAAGCAGTAGTTATTGCAACTGGAGTTCACACATTCTTCGGAAAGGCGGCGCATCTTGTGGAAAACACCACACATGTTGGACATTTCCAGAAGGTTTTGCAATCTATTGGGAACTTCTGCATCTGTTCCATTGCTACTGGAATGCTCATTGAAATCATAGTGATATATGGCCCGCAGCAAAGGAAATACCGAGTTGGTATCGATAACCTCCTTGTGTTACTGATTGGCGGTATCCCTATTGCGATGCCAACTGTCCTTTCAGTTACAATGGCTATTGGTTCACACAAATTAATGACTGCAATTGAAGAAATGGCCGGAATGGATGTTCTATGCAGTGATAAAACAGGCACATTAACTCTCAACAAGCTTACAGTGGACAAGAATCTAATTGAGGTCTTTGCTGATGGAGTTAATCAGGACATGGTTATACTTATGGCTGCAAGGGCATCAAGGCTAGAGAACCAAGATGCAATTGATTGTGCAATTGTATCTATGTTAGCAGACCCAAAGGAGGCACGAGCTGGAATAACTGAAATTCACTTCCTTCCATTCAATCCAACAGATAAAAGAACTGCACTTACATACACCGATGCTGCTGGCAAGATGCACAGGGTTAGCAAAGGTGCACCAGAGCAGATTCTCAACCTTGCACACAAGAAGTCGGAAATTGCACATAGGGTACATGCAATTATTGACAAATTTGCCGAACGTGGCCTTCGCTCGCTGGCTGTTGCCCGCCAGGAAGTACCTGAGGGAACCAAAGAAAGTTTAGGGGGTCCGTGGGAATTTGTCGGCCTACTCCCACTATTTGATCCTCCCCGCCACGATAGCGCTGAAACGATCAGAAGAGCTCTTAATCTTGGTGTGAGTGTCAAAATGATCACTGGTGATCAGCTTGCAATTGCTAAGGAAACAGGAAGGCGTCTTGGAATGGGCTCTAACATGTATCCTTCTTCGTCACTGCTAGGAGAAAGCAAAGATAATTTTGCTTCTGTTCCTGTCGATGATCTTATAGAGAATGCAGATGGTTTTGCTGGTGTCTTTCCTGAGCACAAATATGAGATTGTAAAGAGGTTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGAGTGAATGATGCACCGGCTTTGAAGATAGCCGACATAGGTATCGCTGTAGCAGATGCCACAGACGCTGCAAGAAGTGCCTCTGACATAGTTCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGCAATTTTCCAAAGAATGAAAAACTACACAATATATGCTGTATCTATCACCATTCGTATTGTGGTTGGCTTTATGTTACTCACATGCATTTGGGAATTCAACTTTCCTCCCTTTATGGTTCTTGTCATAGCCATTCTCAACGATGGTACCATCATGACAATATCTAAAGATAGGGTTAAGCCTTCTCCAAGTCCTGATAGTTGGAAGCTGAGTGAGATTTTTGCAACTGGGATTGTCCTAGGAGGTTATCTGGCTCTAATGACAGTGATATTCTTCTGGGCAGCGTATAAAACACATTTTTTTCCTAACCAATTTGATGTGAGACATCTCCACGAAGATCTTCATGGTCCACCTACTCATGAAGAGAGTAAAATGCTAGGAGCTGCTATATATCTTCAAGTCAGTATAATTAGTCAAGCCTTAATTTTTGTGACTCGCTCAAGGGGATGGTCCTATACAGAAAGGCCCGGTGTTTTGCTTATGATCGCTTTTGTTATAGCTCAACTGATTGCAACTATTGTATCTGCCCTTCTCTCTTGGGAGCTAGCAGGAATCAAAGCCATAGGATGGGGTTGGACGGGAATCATTTGGGTCTACTCTATTATAACTTACTTATTTTTGGATCCTATAAAGTTTGCTGTTCGTTATGCATTAAGCGGAAGAGCTTGGAATTTGGTGGTAGACAAACATACTGCATTTATCAACAAAAATGACTTTGGTAGAGAAGCTCGTGAAGCTCAATGGGCTGCTGAGCAGAGAACCTTACATGGTCTCCAGTCTGCTGACATGAAAGTTGAGAAGCACACTTTCAGGGAAATAAATACACTAGCTGACGAGGCCAAGAGGCGTGCAGAAATAGCAAGGATGAGAGAGCTTCACACTCTGAAAGGAAGGGTGGAAACAATGGGCAAGCTAAAGGGTTTAGATGTGGATGCAATCAACAGTCATTACACAGTATAA 2835 0.4303 MELEAIIREQVDLENIPIEEVFENLKCTKEGLTSDQVKERLDLFGHNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIAMAHGGGEGWDYQDFTGIVILLLVNSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVSKHPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQKVLQSIGNFCICSIATGMLIEIIVIYGPQQRKYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFADGVNQDMVILMAARASRLENQDAIDCAIVSMLADPKEARAGITEIHFLPFNPTDKRTALTYTDAAGKMHRVSKGAPEQILNLAHKKSEIAHRVHAIIDKFAERGLRSLAVARQEVPEGTKESLGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGESKDNFASVPVDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVGFMLLTCIWEFNFPPFMVLVIAILNDGTIMTISKDRVKPSPSPDSWKLSEIFATGIVLGGYLALMTVIFFWAAYKTHFFPNQFDVRHLHEDLHGPPTHEESKMLGAAIYLQVSIISQALIFVTRSRGWSYTERPGVLLMIAFVIAQLIATIVSALLSWELAGIKAIGWGWTGIIWVYSIITYLFLDPIKFAVRYALSGRAWNLVVDKHTAFINKNDFGREAREAQWAAEQRTLHGLQSADMKVEKHTFREINTLADEAKRRAEIARMRELHTLKGRVETMGKLKGLDVDAINSHYTV* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3577 944 Pfam E1-E2 ATPase 127 304 - -
Amo14g3577 944 Gene3D - 329 476 IPR023299 GO:0000166
Amo14g3577 944 Gene3D - 893 944 - -
Amo14g3577 944 PANTHER PLASMA MEMBRANE ATPASE 3 924 - -
Amo14g3577 944 ProSitePatterns E1-E2 ATPases phosphorylation site. 319 325 IPR018303 -
Amo14g3577 944 SUPERFAMILY HAD-like 313 622 IPR036412 -
Amo14g3577 944 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 31 801 IPR006534 GO:0008553|GO:0016021|GO:0120029
Amo14g3577 944 Gene3D - 314 612 IPR023214 -
Amo14g3577 944 SUPERFAMILY Calcium ATPase, transduction domain A 129 226 IPR008250 -
Amo14g3577 944 PANTHER CALCIUM-TRANSPORTING ATPASE 3 924 - -
Amo14g3577 944 Pfam haloacid dehalogenase-like hydrolase 313 589 - -
Amo14g3577 944 Gene3D - 129 213 - -
Amo14g3577 944 SUPERFAMILY Calcium ATPase, transmembrane domain M 11 843 IPR023298 -
Amo14g3577 944 Pfam Cation transporter/ATPase, N-terminus 15 78 IPR004014 -
Amo14g3577 944 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 98 336 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo14g3577 944 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 550 655 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo14g3577 944 SFLD C1.7: P-type atpase like 304 626 - -
Amo14g3577 944 PRINTS H+-transporting ATPase (proton pump) signature 575 591 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo14g3577 944 PRINTS H+-transporting ATPase (proton pump) signature 433 451 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo14g3577 944 PRINTS H+-transporting ATPase (proton pump) signature 547 563 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo14g3577 944 PRINTS H+-transporting ATPase (proton pump) signature 606 631 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo14g3577 944 PRINTS H+-transporting ATPase (proton pump) signature 756 777 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo14g3577 944 Gene3D - 91 811 - -
Amo14g3577 944 SMART Cation_ATPase_N_a_2 12 84 IPR004014 -
Amo14g3577 944 CDD P-type_ATPase_H 31 837 IPR006534 GO:0008553|GO:0016021|GO:0120029
Amo14g3577 944 SFLD p-type atpase 304 626 IPR044492 -
Amo14g3577 944 PRINTS P-type cation-transporting ATPase superfamily signature 471 482 - -
Amo14g3577 944 PRINTS P-type cation-transporting ATPase superfamily signature 598 610 - -
Amo14g3577 944 PRINTS P-type cation-transporting ATPase superfamily signature 317 331 - -
Amo14g3577 944 PRINTS P-type cation-transporting ATPase superfamily signature 575 594 - -
Amo14g3577 944 PRINTS P-type cation-transporting ATPase superfamily signature 493 503 - -
Amo14g3577 944 PRINTS P-type cation-transporting ATPase superfamily signature 176 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3577 Amo-Chr14 139857655 139865055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3577 3 944 Primary Pumps ATPases AT5G62670 77.987 0.0 1497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3577 K01535 - gmx:100794938 1571.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3577 14 139857655 139865055 Amo14g3577 14 139857655 139865055 ECH