Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3572 ATGGGAACTGGTGGTGGCGCACCTTCCTCCTCCTCCGCCTCTTCCGGCTGGTCCGGTTTCTGGTCGTCGGCGCTCCGATCAAAGCGCCTCGTCTCTCCGGCGGAGAAGGCGGCCGCTGAAAGCAACGGCCGGGGTCTCTCCCGCCGCCTTGGAGTCCTCGACCTAGTCCTCCTCGGGATCGGTGCTTCCATCGGCGCCGGTATCTTCGTCGTCACCGGCACCGTCGCCCGTGACGCTGGACCCGGAGTAACAATCAGTTTTATACTTGCCGGAGCATCATGTGTTGTAAATGCACTCTGTTATGCCGAGCTAGCTTCTCGTTTCCCTGCTGTTGTCGGAGGAGCGTATCTATACACATACACGGCTTTTAATGAGATCACTGCTTTCCTTGTTTTTGCACAATTAATGCTTGACTATCATATTGGAGCAGCTAGCATAGCAAGAAGCCTGGCAAGCTATGTGGTGTCAATTCTAGAGCTCTTCCCTGTGTTGAARGATAACATTCCAGACTGGATTGGACATGGTCAGRACATTGGGGAAGTTCTGTCCATCAATGTCTTGGCTCCAATTCTCCTAATTCTTCTCACTCTGATTCTTTGCTGGGGTGTTGGAGAATCWTCGGCTGTGAATGCATTCATGACAGTGACCAAGATAGTCATTGTTATAGTTGTCGTTCTTGTTGGAGCTTTTGAGGTTGATGTTTCYAACTGGTCTCCCTTTGCTCCGAATGGCATAAAAAGCATATTTACTGGAGCTACTGTAGTCTTCTTTGCTTATGTTGGATTTGATGCAGTTGCCAATTCTGCCGAAGAATCTAAGAGACCGCAGCGGGATTTGCCAATAGGCATAATTGGAAGCCTCTTAGTTTGTATTGCATTGTATATTGGAGTATGCTTAGTTATTACGGGGATGGTCCCATACATGTATCTTGGAGAAGATGCTCCTTTGGCTGAAGCTTTTACATCTAAAGGATTAAAATTTGTCTCTGTTCTGATTAGTGTTGGTGCCATTGCTGGACTTACAACAACACTCCTTGTTGGTCTCTACGTTCAGTCTCGGTTGTATCTCGGGCTTGGCAGGGATGGTTTACTACCCTCGATATTTGCCAGAGTTAACTCCAAACGGCACACTCCTATTCATTCACAGGTCTGGGTTGGATGTGTTGCCAGTGTTTTGGCTGGACTATTGAACGTAACAATGCTTTCACACATTCTCTCTGTTGGTACACTGACTGGCTATTCAGTTGTCTCGGCATGTGTTGTAGTACTTCGCTGGAAAGATAGGACAAATAGTCAATTATCAACTTCAGCTAAGCAGGAGGGTGTAATTTGCCTCGTTGCTATTGCCGCTTGTGGATTTGCTACTGGGCTCTTATTCCGTTATGATGCCTCACCTATTTTTATGATTCTAGCTATACTTGTTGCAGTAGGTGCTTCTGCTGCTCTTCTTATCCGCCAGGCTTATTCAGATGCGCCAGGATTTTCTTGCCCTGGAGTTCCCCTTCTGCCATGCCTTTGCATCTTTTTTAATATATTCTTATTTGCTCAGTTACATCATGAAGCGTGGGTGAGATTTGTGGTTCTAAGTCTTGTCATGGTTGGTGTTTATGCCATCTATGGCCAGTATCATGCTGATCCCAATGCAGCAGATACCATCATGTATCACCGGGCACCAGAGGATGAAGCTCAATGA 1692 0.4693 MGTGGGAPSSSSASSGWSGFWSSALRSKRLVSPAEKAAAESNGRGLSRRLGVLDLVLLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVVNALCYAELASRFPAVVGGAYLYTYTAFNEITAFLVFAQLMLDYHIGAASIARSLASYVVSILELFPVLKDNIPDWIGHGQXIGEVLSINVLAPILLILLTLILCWGVGESSAVNAFMTVTKIVIVIVVVLVGAFEVDVSNWSPFAPNGIKSIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYMYLGEDAPLAEAFTSKGLKFVSVLISVGAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFARVNSKRHTPIHSQVWVGCVASVLAGLLNVTMLSHILSVGTLTGYSVVSACVVVLRWKDRTNSQLSTSAKQEGVICLVAIAACGFATGLLFRYDASPIFMILAILVAVGASAALLIRQAYSDAPGFSCPGVPLLPCLCIFFNIFLFAQLHHEAWVRFVVLSLVMVGVYAIYGQYHADPNAADTIMYHRAPEDEAQ* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3572 563 Pfam C-terminus of AA_permease 494 543 IPR029485 -
Amo14g3572 563 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 12 562 - -
Amo14g3572 563 Pfam Amino acid permease 50 459 IPR002293 GO:0016020|GO:0022857|GO:0055085
Amo14g3572 563 Gene3D Amino acid/polyamine transporter I 46 478 - -
Amo14g3572 563 PANTHER CATIONIC AMINO ACID TRANSPORTER 9-RELATED 12 562 - -
Amo14g3572 563 PIRSF AA_transporter 441 563 - -
Amo14g3572 563 PIRSF AA_transporter 34 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3572 Amo-Chr14 139766359 139770584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3572 1 489 Organic Solute Cotransporters AT1G05940 71.313 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3572 K03294 - gmx:100804988 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3572 14 139766359 139770584 Amo14g3572 14 139766359 139770584 ECH
Amo14g3572 14 139766359 139770584 Amo04g2647 04 99567245 99571404 hybridization
Amo05g4579 05 118446498 118448658 Amo14g3572 14 139766359 139770584 PCT
Amo15g1582 15 113142210 113144569 Amo14g3572 14 139766359 139770584 PCT