Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3532 ATGCAAGGAGGAGAGAGAGGTGGTGTTCCCAATTATGAGCTTCAAGTTCCATTCACCAACATCACCACACCTTCACAAGCCATAATCCATGAAATGAGCTTTGTTCAGTTTGAAGAAAACCACCTCCTTGGCTTCTTGTCACCTACTTCATCACAATCTCAATCTTCTCAACTCTCTCAATCCTTAGATGCTGCCACCATCCTTGCCACCACCACTACGCCCGCCACAATTGCAACCACAACCGCCACAACAAAAAATTGGCATCACAAGCAGGTGGGAACTCTGGATCCAAAGGCTATGAATGATGAAAATTGCACTGGAAATTCTAGTGAAGGCAACAATAATATTACATGGTGGAAGAGTAGTGCAGCCACAGAGAAGAACAAGGTGAAAATGAGAAGGAAACTAAGAGAGCCAAGGTTTTGTTTCCAAACAAGAAGTGATGTTGATGTTCTTGATGATGGTTATAAATGGAGGAAATATGGCCAAAAAGTTGTCAAGAATAGCCTTCATCCAAGGAGTTATTACAGGTGTACACATAGCAACTGCAGGGTGAAGAAGAGAGTTGAAAGACTCTCAGAAGATTGTAGAATGGTGATAACCACTTATGAAGGTAGACACAATCACATCCCTTCCGATGACTCAAATTCTTCAGACCATGAATGTTTCACTTCTTTTTAA 681 0.417 MQGGERGGVPNYELQVPFTNITTPSQAIIHEMSFVQFEENHLLGFLSPTSSQSQSSQLSQSLDAATILATTTTPATIATTTATTKNWHHKQVGTLDPKAMNDENCTGNSSEGNNNITWWKSSAATEKNKVKMRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHIPSDDSNSSDHECFTSF* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3532 226 Pfam WRKY DNA -binding domain 153 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g3532 226 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 22 224 - -
Amo14g3532 226 Gene3D WRKY domain 138 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo14g3532 226 SMART WRKY_cls 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g3532 226 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 22 224 IPR044810 GO:0003700
Amo14g3532 226 ProSiteProfiles WRKY domain profile. 147 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g3532 226 SUPERFAMILY WRKY DNA-binding domain 144 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3532 Amo-Chr14 138935353 138939781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3532 1 226 WRKY Transcription Factor Family AT2G44745 57.576 6.69e-78 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo14g3532 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3532 - - aip:107637204 320.087