Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3496 ATGTCAATCTTCGATGGAGCATTCATGGACACAGAGCTCTCAAAGCGAACCTCAATCTTCGGCCTCCGCCTCTGGGTCGTCATCGGAATCCTCGTCGGAGTCCTCATCGTATTTACCCTCTTTCTTCTCTCCCTCTGCCTCACCTCCCGCCGCCACCGCCGCCGCCGAACCGTTGCCGGAAAATATTCATCCGCCGGAGCACCACCAGCCAAGGAGATCCAGGAGATAGTCCACCTCCCTGGACCACACATGCTCCGGCAGCCTCAGGCGCCGGCGCCGGTGCCAGAGATTCACGTTGACTTCGGAAARGTGGAGCAYCGTGTGGTGGTRCACTCTGATAACAACAACAACAGCAACAATAGAGGAGTGTCTAGYGGTGARAGTAAAGGAACTGTTAGTGGCTGTGAAACGACATCGTCGTTTGGGAGTGGGAGTGTCGTTTTGGGGGTTGGTGGTGGTGGTGTTGGTGTGGGACCTGAGGTTTCTCATCTTGGTTGGGGAAGATGGTACACTTTGAGAGAACTTGAAGCTGCTACTAATGGATTGTGTGAAGAGAATGTGATTGGTGAAGGTGGTTATGGCATTGTTTATTCTGGCGTTCTAAGTGATGGTACCAAAGTTGCTGTCAAGAATCTCTTGAATAACAAGGGCCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGAGTTCGACACAAAAATCTTGTTAGGTTACTTGGCTATTGTGTTGAGGGGGCCTACAGGATGCTTGTGTATGAATATGTGAACAATGGGAATCTAGAACAATGGCTCCATGGGGATGTTGGACCTGTAAGTCCCTTGACATGGGATATACGCATGAACATCATCTTGGGAACTGCAAGAGGATTGGCATATCTTCATGAAGGTCTTGAACCAAAGGTTGTCCACCGGGATGTGAAATCGAGTAATATACTCATTGATCGCCAATGGAACTCTAAGGTTTCTGATTTCGGGCTCGCTAAACTTTTGTGTTCTGAGAATAGCTACRTCACAACTCGAGTGATGGGGACATTTGGTTATGTTGCACCGGAGTATGCYTGCACCGGAATGTTGACCGAAAAGAGTGACGTTTATAGCTTCGGGATACTCATCATGGAGATAATTACCGGGAGGAGTCCTGTCGATTATAGTAGACCACAAGGAGAGGTTAACTTAATAGATTGGTTGAAGACTATGGTTGGGAATAGAAAAGCTGAAGAGGTAGTTGATCCTAAGCTCCCTGAGATGCCAACCTCCAAGGCCCTTAAACGTGCTATATTGATTGCCCTTCGWTGTGTTGACCCTGACGCGACAAAGAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCAGATGATCTGTTATTCCAACATGAACGAAAAACTGAGGGAGAATCTTCGCGTTCGCAACGACAAGAGCGCAAGGACTCAGATTTAGATAAGAGGATACCAGATGGAGGGATCACTGATCAAAGTGAAGATGATAGTAATAGAAATCACCAGCAGCATACTAGGTGGAGATGA 1536 0.4746 MSIFDGAFMDTELSKRTSIFGLRLWVVIGILVGVLIVFTLFLLSLCLTSRRHRRRRTVAGKYSSAGAPPAKEIQEIVHLPGPHMLRQPQAPAPVPEIHVDFGKVEHRVVVHSDNNNNSNNRGVSSGESKGTVSGCETTSSFGSGSVVLGVGGGGVGVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYSGVLSDGTKVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLEQWLHGDVGPVSPLTWDIRMNIILGTARGLAYLHEGLEPKVVHRDVKSSNILIDRQWNSKVSDFGLAKLLCSENSYXTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLIDWLKTMVGNRKAEEVVDPKLPEMPTSKALKRAILIALRCVDPDATKRPKMGHVIHMLEADDLLFQHERKTEGESSRSQRQERKDSDLDKRIPDGGITDQSEDDSNRNHQQHTRWR* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3496 511 MobiDBLite consensus disorder prediction 111 136 - -
Amo14g3496 511 Pfam Protein kinase domain 185 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3496 511 Gene3D Phosphorylase Kinase; domain 1 166 257 - -
Amo14g3496 511 PANTHER OS01G0323000 PROTEIN 1 502 - -
Amo14g3496 511 MobiDBLite consensus disorder prediction 461 511 - -
Amo14g3496 511 ProSitePatterns Protein kinases ATP-binding region signature. 188 210 IPR017441 GO:0005524
Amo14g3496 511 Gene3D Transferase(Phosphotransferase) domain 1 258 471 - -
Amo14g3496 511 CDD STKc_IRAK 188 454 - -
Amo14g3496 511 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 502 - -
Amo14g3496 511 SMART serkin_6 182 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3496 511 SUPERFAMILY Protein kinase-like (PK-like) 161 454 IPR011009 -
Amo14g3496 511 ProSiteProfiles Protein kinase domain profile. 182 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3496 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3496 Amo-Chr14 138288117 138292851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3496 169 510 Trihelix Transcription Factor Family AT5G38560 45.042 1.44e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Amo14g3496 Pkinase 2.2e-47 CL0016