Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3495 ATGGCAACCACTCATTCTCTTCTTCACTCGTCGAGTTCCTCTTTCCTTGCTCAGTTTCGTCCCTTTCCACCTCCACACTCTTCTTCTTCATCATTTCCGTTTTCTCATGGAACAAGGCATGGATTGCTGTCTGTGAAGGCCTCTGATTCTGGTGCTGCGGTGCTCGTTGACAAGTCCGAAGCAGAGACTGTTCATCGTCTCAAAACTACGTACAAAGACAAAATTGTTCCTTTGCTCATGGAGGAGTTCAATTACACCAATATCCACCAGGTGCCGAAGATCGAGAAAATTACAGTTAACTGCGGTATTGGTGATGCTGCACAAAATGCAAAGGGTTTGGAAGCAGCAATGAATGATCTGGCTCTGATCACAGGGCAGAGACCGATTAAGACTCGGGCTAGGGCTTCTGTTGCCACCTTCAAGATTAGGGAAGGTCAACCACTTGGGATAGCCGTGACACTCAGAGGAAAGGTCATGTACAACTTCCTAGACCGAGTTATCAACTTAGGACTTCCTAGGACAAGAGATTTTCAAGGTCTGAACCCCAACAGCTTTGATGGCAATGGGAACTACAGCGTCGGCGTTAAGGACCAGGGTGTGTTCCCGGAGATCAAATACGACGCTGTYGGCAAACCTAGGGGAATGGATATCTGCATMACGACRACGGCTAAAACCGATCAAGAAGCGCAAAAGTTGTTAGTTCTTATGGGCATGCCRTTCAGAGAGGGAGGTGGTCCTGCCTCTACAATGCGCAAGAAGAAGCTCAAGTCTCATCATTTTGATCCAAAAGCAAAGGGAAGAGCAAGGAAGTAA 813 0.4711 MATTHSLLHSSSSSFLAQFRPFPPPHSSSSSFPFSHGTRHGLLSVKASDSGAAVLVDKSEAETVHRLKTTYKDKIVPLLMEEFNYTNIHQVPKIEKITVNCGIGDAAQNAKGLEAAMNDLALITGQRPIKTRARASVATFKIREGQPLGIAVTLRGKVMYNFLDRVINLGLPRTRDFQGLNPNSFDGNGNYSVGVKDQGVFPEIKYDAVGKPRGMDICITTTAKTDQEAQKLLVLMGMPFREGGGPASTMRKKKLKSHHFDPKAKGRARK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3495 270 Hamap 50S ribosomal protein L5 [rplE]. 64 242 IPR020930 GO:0003735|GO:0005840|GO:0006412
Amo14g3495 270 MobiDBLite consensus disorder prediction 243 270 - -
Amo14g3495 270 Pfam Ribosomal protein L5 87 143 IPR031310 -
Amo14g3495 270 Gene3D - 58 242 IPR022803 -
Amo14g3495 270 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 61 242 IPR002132 GO:0003735|GO:0005840|GO:0006412
Amo14g3495 270 SUPERFAMILY RL5-like 66 241 IPR022803 -
Amo14g3495 270 ProSitePatterns Ribosomal protein L5 signature. 120 136 IPR020929 GO:0003735|GO:0005840|GO:0006412
Amo14g3495 270 Pfam ribosomal L5P family C-terminus 147 240 IPR031309 -
Amo14g3495 270 PANTHER 54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL 61 242 - -
Amo14g3495 270 MobiDBLite consensus disorder prediction 251 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3495 Amo-Chr14 138259215 138262825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3495 93 220 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 27.344 1.40e-07 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3495 14 138259215 138262825 Amo04g2343 04 95316501 95320108 hybridization