Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3488 ATGAAGAATCTTGTGGGGATTAATTTGAGAGTGGAACAAGTGATTACTCTCATAGGCCTTGGATTGAATGATGTTCGCTTTATAGGTCTATGGGGTATGGGCGGGATTGGTAAGACAACTATTGCTAGAGCAGTCTTTGAAACCATTCGAAATAGATTTGAAGTTACTTGCTTTCTTGCCGACGTTAGGGAGCAATGCGAGAAAAAAGACATTACTCACATACAAAAGCAACTTCTTAAACAAATGAATATAAGTTCAAATGCTGTTCATAACAAGTATGATGGGAGAACAAGAATTCAAAACTCTCTACATCTCAAAAAGGTACTTCTTGTTCTTGATGATGTAAATCATGAAAAACAATTAGAGGATTTGGCAGGGCAGCAAGATTGGTTTGGTCCTGGAAGCAGAATAGTAATTACAACTAGAGACTTAGAGGTGCTAAAGAAACAAGAGGTGCATGAAACTTATAAGGTTGAAGGGTTAGTGAAAAGTGAAGCCTTTAATCTCTTTTGTCTGAAAGCCTTTAAACAGCAGGAGCCTACAGAAGGATTTTTGGATTTGTCTGAAGAAGTGGTCAAGTACAGTGGTGGTCTTCCATTGGCACTTAAAGTATTGGGTTCCTATCTTTATGGTAGACCTATTGCGGTTTGGCATAGTGCTATCGAAAAAATAAAGAAGTCTTCACATTCTGAAATTATTGATACTTTGAAAATAAGCTATGAGGGTTTAGATGATATGGAAAAGAATATTTTTCTAGATATTGCTTGTTTCTTTAAAGGACTGGGGAAAGAATATGTAACAACGATATTAGAAGGATGTGGTTATCAGGCTGAAATTGGTCTTGATATTTTGATTAACAGATCATTAGTTACTATTAAAAATGATCGACTGGGAATGCATGATCTGCTTGTAGAAATGGGCAAACAAATTGTAATTCAGAAATCTCCGAATGATGCTTGTGAGCATAGCAGATTGTGGTGTTTGGAGGATGTTGAATTTGTACTTACTCAAAAGAAGAAAACTAAAGCAACTCATGGCATCGTTCTACATAAGAGGTATAGCGAGACTGAAGTGAATCAGAGAGATTTATCTTTCTCAAAAATGTGTCAGTTAAAGCTTCTCATTTTAAATACCGTGGAAGCTCCCATTCTCTGCGATATTCCTTGTACATTAAAGGTATTTCACTGGAAATGCTGTCCACTGAAAACTCTGCCCCTTACAGATCATCAACGCTATGAACTTGTTGAAATTAATCTGTCTGATAGCAAAATTGTACAGTTATGGGATGGAGAGAAGGTTCTAGAAATGTTAGAGCACTTGAATCTGTCTAGGTGCATGAAGCTGAAACAAACGCCATACCTTTCTGGGGCTCCCAATCTTAAAAAACTTGTTCTTTGGGGATGCCGGAAGTTGAATTATATTCACCCGTCTCTCGCACACCACAAGAGACTTGTTGAATTGGATTTAGGTAAATGTATCCGTCTTGAAACACTTGGAGATAAATTGGAGATGAGTTCACTCGAGATACTAGATCTATCTGACTGCAGTAGTTTGAGAAGACTGCCAGATCTTTATGGGGCTCCCAATCTTAAAACACTTGAGCTTAGGGGATGCGAGGAGCTGGATTATATTCACCCGTCTCTCGTACAACACAATAACCTTGTTGAATTGAATTTAAGTGGATGTAGGAGTCTTGAAACACTAGGAAATAAATTGGAGATGAGTTCACTCAAGAAACTAGATCTAAGCTTGTGCAGTAGTTTGAGAAGACTGCCAGAATTTGGGAAATGCATGAAACAGTTATCCATTCTTAGGCTGGTATATTCAGGTATAGAAGAGCTACCCCAGACGCTTGGAAATTTGGCTGGCGTGTCTGAGTTGGACTTAACTGGATGCTACAAGATTACTGGTCTTCCCTTATCACTTGGATGTTTCGTTGGCCTAAAAAAGTTGGTGTTAAGTAGATTCGTCGAACTTAGTTGTCTTCCACACAAAACTCACGGGTTAGAGTCCCTCACAGTTGAGGATTTTTCTGACAGCCCAAATATTGTTGGATTTTTGCGTTCTCTCTCTTGCCTGAGCCTGACCTCTTTGAGTAGCCTGACCCTTTCCTACTATATTGGGTCATCTAGAGAAGAGTCGACCCTTTCCTATGATATTGCCCACTTAGCGTCGTTGACCTTTTTGGATTTATCTATGAGCAGTTTTTTAAGGGTTCCAGTAAGTATCCATCAACTTCCCAGACTTACGCGTGTAAAGCTATCTTTTTGCGATGAATTGGAGGTTTTACCAGAGCTTCCATCAAGTCTAAGAGAATTAGACGCACAGGGTTGTTATTCACTGGATGCGTCGAATGTTGATAATGTTATATCAAAGGCATGTTGTGGCTTTGCAGAATCAGCTAGCCAAGATCGTCAAGACTTCTTGCAAATGTTGATCACAGGGGAGGAACTTCCCGCATGGTTTGAGCATCAGGAACAAGATAATGGAGTATCAGTCTCATTCCCACTTAATTGCCCTTCAACTGAAATGGTCGCACTTGCTCTCTCTTTCCTATGTGAAGGTATCAAAGGTTTCAGAAGATTCCAGCCTTCGGTGATCTGCAACGGGAAAGAATTCATCAACGCGAGTTTATCCGTGATGAAAAGTGAGGATTCTTTGTTCATTGTGTGCGTGAACGGTTACTATTTTAGGAAAAGAAAAGCAACTCTTGAACTGAACATGGACATGATTTCACATTCTTCAGCTTCTATAAATAAGATGCTCGTGGTTGACTCTCCCGTGTATGAACAAGAGATAGAGCTAGCCGCCACAGCGGAGGCCTCTATTAGCCATTTGCCATCTCGCAAAAGCTCTGACCCATCTCGCAAAAGCACTTAG 2880 0.3976 MKNLVGINLRVEQVITLIGLGLNDVRFIGLWGMGGIGKTTIARAVFETIRNRFEVTCFLADVREQCEKKDITHIQKQLLKQMNISSNAVHNKYDGRTRIQNSLHLKKVLLVLDDVNHEKQLEDLAGQQDWFGPGSRIVITTRDLEVLKKQEVHETYKVEGLVKSEAFNLFCLKAFKQQEPTEGFLDLSEEVVKYSGGLPLALKVLGSYLYGRPIAVWHSAIEKIKKSSHSEIIDTLKISYEGLDDMEKNIFLDIACFFKGLGKEYVTTILEGCGYQAEIGLDILINRSLVTIKNDRLGMHDLLVEMGKQIVIQKSPNDACEHSRLWCLEDVEFVLTQKKKTKATHGIVLHKRYSETEVNQRDLSFSKMCQLKLLILNTVEAPILCDIPCTLKVFHWKCCPLKTLPLTDHQRYELVEINLSDSKIVQLWDGEKVLEMLEHLNLSRCMKLKQTPYLSGAPNLKKLVLWGCRKLNYIHPSLAHHKRLVELDLGKCIRLETLGDKLEMSSLEILDLSDCSSLRRLPDLYGAPNLKTLELRGCEELDYIHPSLVQHNNLVELNLSGCRSLETLGNKLEMSSLKKLDLSLCSSLRRLPEFGKCMKQLSILRLVYSGIEELPQTLGNLAGVSELDLTGCYKITGLPLSLGCFVGLKKLVLSRFVELSCLPHKTHGLESLTVEDFSDSPNIVGFLRSLSCLSLTSLSSLTLSYYIGSSREESTLSYDIAHLASLTFLDLSMSSFLRVPVSIHQLPRLTRVKLSFCDELEVLPELPSSLRELDAQGCYSLDASNVDNVISKACCGFAESASQDRQDFLQMLITGEELPAWFEHQEQDNGVSVSFPLNCPSTEMVALALSFLCEGIKGFRRFQPSVICNGKEFINASLSVMKSEDSLFIVCVNGYYFRKRKATLELNMDMISHSSASINKMLVVDSPVYEQEIELAATAEASISHLPSRKSSDPSRKST* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3488 959 PRINTS Disease resistance protein signature 27 42 - -
Amo14g3488 959 PRINTS Disease resistance protein signature 502 518 - -
Amo14g3488 959 PRINTS Disease resistance protein signature 195 209 - -
Amo14g3488 959 PRINTS Disease resistance protein signature 102 116 - -
Amo14g3488 959 Gene3D - 1 157 IPR027417 -
Amo14g3488 959 Pfam NB-ARC domain 24 235 IPR002182 GO:0043531
Amo14g3488 959 Gene3D Ribonuclease Inhibitor 570 795 IPR032675 -
Amo14g3488 959 PANTHER TMV RESISTANCE PROTEIN N-LIKE 4 518 - -
Amo14g3488 959 SUPERFAMILY "Winged helix" DNA-binding domain 230 335 IPR036390 -
Amo14g3488 959 Gene3D - 161 244 IPR042197 -
Amo14g3488 959 SUPERFAMILY L domain-like 692 779 - -
Amo14g3488 959 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 518 807 IPR044974 GO:0006952
Amo14g3488 959 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 518 IPR044974 GO:0006952
Amo14g3488 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 254 IPR027417 -
Amo14g3488 959 SUPERFAMILY L domain-like 371 678 - -
Amo14g3488 959 PANTHER TMV RESISTANCE PROTEIN N-LIKE 518 807 - -
Amo14g3488 959 Gene3D Ribonuclease Inhibitor 503 569 IPR032675 -
Amo14g3488 959 Gene3D Ribonuclease Inhibitor 354 502 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3488 Amo-Chr14 138178336 138181639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3488 5 618 WRKY Transcription Factor Family AT5G45050 32.470 2.92e-87 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3488 - - adu:107485828 1280.77