Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3486 ATGGAAAGACCATTGATAACAATAGATGAGAATAATATGTTTGCCATCCATAATTTGCTTCAAGACATCAACAACCTGGGGCTACAGATTGTGGCAGTGTTCTATCATGTCAAGCCTTGCAACGTCAGGCATCAAATTGGAGCCTTTGAAGATGCTTTCAAGAAACATGAACTCAGATTTGGACAAGAAAGTGACAGGGTTAGAAGATGGAGAAATGCCTTAACACAAGTTGTCAGTTATTCTAATTGCGACTCTGAACGATTCGAGAACGAGGCCATACTCGTGGAAAGCATTACTCAACATATACATGAAAGATTGATTATGAAATTACCATCTTCAATGGAGAATCTGGTAGGGATTGATTCAAGGTTGGAAGAAGTTGTAAGACACATCGGTATTGGGGTGGATGATGTTCGTTTCATTGGCATATGTGGAATGGGTGGCATAGGTAAGACAACTATTGCTAGAAGAGTCTATGAAAGCATTCAAAGTGAATTTAAAGCTAGTTGTTTTCTTGTCAAT 522 0.387 MERPLITIDENNMFAIHNLLQDINNLGLQIVAVFYHVKPCNVRHQIGAFEDAFKKHELRFGQESDRVRRWRNALTQVVSYSNCDSERFENEAILVESITQHIHERLIMKLPSSMENLVGIDSRLEEVVRHIGIGVDDVRFIGICGMGGIGKTTIARRVYESIQSEFKASCFLVN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3486 174 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 20 174 - -
Amo14g3486 174 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 81 IPR035897 -
Amo14g3486 174 Pfam NB-ARC domain 136 166 IPR002182 GO:0043531
Amo14g3486 174 Gene3D - 104 174 IPR027417 -
Amo14g3486 174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 172 IPR027417 -
Amo14g3486 174 Gene3D - 11 103 IPR035897 -
Amo14g3486 174 Pfam TIR domain 25 116 IPR000157 GO:0007165
Amo14g3486 174 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 174 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3486 Amo-Chr14 138035161 138036667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3486 118 172 WRKY Transcription Factor Family AT5G45050 45.455 4.98e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3486 - - ahf:112743218 287.345