Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3485 ATGTTAACAATATTTACTAAACACAACACTGCTAAAAAAAATATACACACCACAAAACACAATCTGTTATTACACTTTCCCATATACATGGCAATGGCATCTTTAGCTGCTGAAGCCTCTTCTTTCTCCACTCCTCCTTCACCAAGATCATGGACCTATCACGTGTTCTTGAGTTTCCGGGGTGAAGACACTCGCACAGGCTTCACTGATCATTTATGTGCCTCGCTTGAAAGGAAGGGAATCACAACTTTCAGGGATGACAAAGACCTTGAGAGAGGTCAAGTTATCTCTCTTGAACTTCTCAGAGCAATTCAAGAGTCCATGTTCGCGGTCGTTGTTCTCTCGCCAAACTATGCTTCCTCTGCTTGGTGCTTGGATGAGCTTCAAAAGATTGTTGAGTGCAAACACAACCTGGGGCTACAGATTGTGCCTGTCTTCTATGGTGTTGAGCCCTCTGATGTGCGACACCAAAAAGGAACCTTTGATGAAGCTTTCAGAAAACATGAACACAGATTTGGTGAAGGCAGTGAGAGGGTTAGAAGGTGGAGAGATGCTTTCGCACAAATTGCTAGTTATTCTGGTTGGGATTCCAAACATCAACTTGAGGCAAGATTTGTGGAAAGCATTTCTGAACACATACATAGAAAGCTAATTCCGAAATTGCCATCTTGCACTAAGAATCGTGTTGGGATTGCTTCAAGGTTGGAGGAAGTGATTAATCTCATAGGTATTGGGTTGAATGATGTTCGCTTTTTAGGGATATGGGGAATGGGTGGCATAGGAAAGACAACTATAGCGAGAGCAGTATACGAAGCCATCCGAGGTGAATTCAAAGTTTGTTGCTTCATGCGAAATGTTAGAGAGTTGTCTGCAAAAAATGGTTTTGTTCAGTTGCAAAGAGACCTTCTTGCATGTCTAAACATAAATAGCTATTTTCATGACATAGAAGATGGAAAATCAATGATAAAAAGTGCTTTGTGCAATAAGAAAGTTCTTCTTGTTCTTGATGATGTAAGTGAGCTAAAGCAATTAGAGAATTTAGCAGAGAATCAAGATTGGTTTGGACCGGGAAGTAGAATAATAATCACAGCCAGAGATATGCACTTGCTAGATATACATGGAGTCCATGGAACTTATGAAGTTAAAGGGTTAGATCAAGAAGAAGCTTATAATCTGTTTTGTTTGAAAGCCTTTAAACAACTTGAACCTAAAGAAGGATATTCTTCTCTGGGTAAAGAAGTTGTGAAATATACTAAAGGTCTTCCTTTGGCAGTTGAGGTTTTAGGTTCCTATCTATATAGAAGAAATGCTGACTTTTGGCATAGTACCATTAGAGAAATAATGAATTTTCCACATTTTGAAGTTCTCAATGCATTGAAAATAAGCTACAATCATTTGATGACAACAGAGAAGAATATTTTTCTTGATATTGCTTGTTTCTTCAAAGGAATGAAAAAAGATGAGGCAATACATATATTAAGAATGTGTGATTTTTATGTTGGAGTTGGAAGTGATATTGGAAGCGGAATTGTTACATTGATTGATAAAGCTTTGGTAACTTTAGATCAAAATAATAAGTTAGAAATGCATGATTTGCTTCAAGAAATGGGGAGGCATATTGTGTATGAAGAATCTCCAAGTAACCCAGGCAAGCGTAGCAGGCTGTGGTCTAAAGATGACATTCATCAAGTGTTGACAAATGATCTGGGAACAGAAGCTATTCAAAGTATGGTTCTAAACTTTGGACATGATAAATTTTATTGGTTCCGGAGTAAGCCATTCTCAGCACATTGGAGCATGGAAGCTTTCTCAAAGACAACACAGTTAAGATATCTCAGTTTACCATACATGGAACTTCCCCTTGGCCTCAACCACTTCCCTAGTTCAGTAAGAGTTCTGCATTGGGATTTTTGTCCTTTGGAAACTCTCCCCTTGTTAAATCAACAATATCAAGCTGTTGAAATCAAAATGCAACGTAGCAATCTTGAACAAGTTTGGCATGGAAAAAAGTTTTTGGAAAAGCTGAAGTACCTGGATTTGAGTAGCTCCCGCAACCTAAAGCAGACACCTGATATTTCCGGGGTTCCCATCCTTGAAACACTTGATCTCCAAGGTTGTGATAGCCTAACTGAGGTTCACATATCCCTCATACACCACAAGAACCTTGTTCACTTAAATCTAAGCTACTGCGAAATGCTTAAAACTCTTCCAGGTAAATTAGAGATGAGTTCCTTGAAGGAGTTGATCATTGAGCATTGTCAGAGTTTTGAAAATCCCCCAGAGTTTGGAGAATGCATGAGAAAATTGTCAAGACTTTCTCTAAGCGGAACTCCTATAGGAAAGTTACCCTCATCACTTGGAAATTTAGTTGGCCTTGAAGATTTGAACATAAAGGGTTGTGGAAAACTTGATTCTGTTCCTGATACCATTCATAGGTTAAAGTCCCTCAAGAACTTGGATCTTGGCTCTTGTTTTAACCTTCATGGATTACCATCTTCAATTTCAAGCCTCCCTTTGTTGAGTAATCTAAATTTGAGTGGATGTTACCAGAGTGAAATATCTTTCTCTCATGATCTATTTTGCTACTTCCCATCATTGATGCATTTGGATCTAAGTGGTCACTGGTTTGCTAATATCCCAATAAGCATTCATGAACTTTCCAAGCTTAGGTCCCTTAAGCTAAATAGATGTGGTTGTCTTCAGTTTCTTCCAAAACTTCCATCTAGTATTAGAGAATTAGAAGCATATGGGTGTAGATCACTGAACATACTTGAATCCAATGTTTTGTCAACCATTTGCACTGCCTTTAAATCTTCTAGTAGCCAGGATCAAGAAAATCAAGGTGTGGTCTTGGAAATGCTGATCCCAAGTGCCAAAATTCCATCTTTGTTTGTCAATTATTCTCTGAATGGTAATGATGCAGCACAAGCAGTAGTCCCATATCCAAGTGATTGCCGTCTGAATAAAAATTTAAAGGGTATTGCAGTATGTTTCCTGTTTTATACAAAGTTTTGGGGATTTGATAAATCAGTGAAGTTGAATTTGTCTGTTAGCAATGGTAATAGGTGCATCATTCCTTGGAGAACATATAGAATGTGTGATGGTTATCACCTTTACATTCTCTGCTTGACCAATGATTACTTCAGGGGAGAATTTCACCGAGATATGGGGTTTAAACTATTGCTTCGGCCGGAGGTTGAGTATGGGGAATTTGATTCTGAAGAGTTCGAATATCTTCCTTGTTATCATGCCAAAGTATTGAGCACTGGCTGGACATGCATTGAGGATATTGAAGATTTGAACAAAAGTGAGATTGAAAGGCAAAAGAATGAAAGACAAAGTCTGTTTGACTTGAACAAAAGCATTGAGATAATGGATATATGTGAGACAAACAAATTTGAAGATAATGTGAGTGAACTGAACAACTTTGGCAGGGAAGAAAGTTTTTGA 3450 0.382 MLTIFTKHNTAKKNIHTTKHNLLLHFPIYMAMASLAAEASSFSTPPSPRSWTYHVFLSFRGEDTRTGFTDHLCASLERKGITTFRDDKDLERGQVISLELLRAIQESMFAVVVLSPNYASSAWCLDELQKIVECKHNLGLQIVPVFYGVEPSDVRHQKGTFDEAFRKHEHRFGEGSERVRRWRDAFAQIASYSGWDSKHQLEARFVESISEHIHRKLIPKLPSCTKNRVGIASRLEEVINLIGIGLNDVRFLGIWGMGGIGKTTIARAVYEAIRGEFKVCCFMRNVRELSAKNGFVQLQRDLLACLNINSYFHDIEDGKSMIKSALCNKKVLLVLDDVSELKQLENLAENQDWFGPGSRIIITARDMHLLDIHGVHGTYEVKGLDQEEAYNLFCLKAFKQLEPKEGYSSLGKEVVKYTKGLPLAVEVLGSYLYRRNADFWHSTIREIMNFPHFEVLNALKISYNHLMTTEKNIFLDIACFFKGMKKDEAIHILRMCDFYVGVGSDIGSGIVTLIDKALVTLDQNNKLEMHDLLQEMGRHIVYEESPSNPGKRSRLWSKDDIHQVLTNDLGTEAIQSMVLNFGHDKFYWFRSKPFSAHWSMEAFSKTTQLRYLSLPYMELPLGLNHFPSSVRVLHWDFCPLETLPLLNQQYQAVEIKMQRSNLEQVWHGKKFLEKLKYLDLSSSRNLKQTPDISGVPILETLDLQGCDSLTEVHISLIHHKNLVHLNLSYCEMLKTLPGKLEMSSLKELIIEHCQSFENPPEFGECMRKLSRLSLSGTPIGKLPSSLGNLVGLEDLNIKGCGKLDSVPDTIHRLKSLKNLDLGSCFNLHGLPSSISSLPLLSNLNLSGCYQSEISFSHDLFCYFPSLMHLDLSGHWFANIPISIHELSKLRSLKLNRCGCLQFLPKLPSSIRELEAYGCRSLNILESNVLSTICTAFKSSSSQDQENQGVVLEMLIPSAKIPSLFVNYSLNGNDAAQAVVPYPSDCRLNKNLKGIAVCFLFYTKFWGFDKSVKLNLSVSNGNRCIIPWRTYRMCDGYHLYILCLTNDYFRGEFHRDMGFKLLLRPEVEYGEFDSEEFEYLPCYHAKVLSTGWTCIEDIEDLNKSEIERQKNERQSLFDLNKSIEIMDICETNKFEDNVSELNNFGREESF* 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3485 1149 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 49 1106 - -
Amo14g3485 1149 SMART till_3 52 192 IPR000157 GO:0007165
Amo14g3485 1149 Gene3D - 383 472 IPR042197 -
Amo14g3485 1149 Pfam NB-ARC domain 248 449 IPR002182 GO:0043531
Amo14g3485 1149 SUPERFAMILY "Winged helix" DNA-binding domain 454 565 IPR036390 -
Amo14g3485 1149 Pfam TIR domain 53 223 IPR000157 GO:0007165
Amo14g3485 1149 Gene3D Ribonuclease Inhibitor 562 940 IPR032675 -
Amo14g3485 1149 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 49 1106 IPR044974 GO:0006952
Amo14g3485 1149 SUPERFAMILY L domain-like 589 923 - -
Amo14g3485 1149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 477 IPR027417 -
Amo14g3485 1149 PRINTS Disease resistance protein signature 325 339 - -
Amo14g3485 1149 PRINTS Disease resistance protein signature 418 432 - -
Amo14g3485 1149 PRINTS Disease resistance protein signature 670 686 - -
Amo14g3485 1149 PRINTS Disease resistance protein signature 251 266 - -
Amo14g3485 1149 ProSiteProfiles TIR domain profile. 51 213 IPR000157 GO:0007165
Amo14g3485 1149 Gene3D - 218 376 IPR027417 -
Amo14g3485 1149 SUPERFAMILY Toll/Interleukin receptor TIR domain 43 195 IPR035897 -
Amo14g3485 1149 Gene3D - 47 217 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3485 Amo-Chr14 138029159 138033883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3485 46 870 WRKY Transcription Factor Family AT4G12020 30.189 4.58e-101 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3485 - - aip:107635063 2298.47