Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3475 ATGGCGTCCTTTGTAGGCGATGAAGCCTCTTCTAGCTCATTAATGCCACGACCATGCACCTATAAGGTGTTCTTAAGTTTTAGGGGAAAAGACACTCGCAAGGGATTCACTAGCCATCTCTATGCCGCACTTGTCAACAGGGGAATCACAACTTACATTGATGACAAGAATCTTCGCAAAGGCGATCTTATTTCAGATGAACTCCTCATAGCAATTGAAGAGTCTATGTTTGGTGTGATAGTTCTCTCACCGAACTACGCTTCCTCCAGATGGTGCTTGGATGAGCTCCAGAAGATTGTTGAGTGCAACAACAACCTGGGGCTACAGATTGTGGCAGTGTTCTATCATGTCAAGCCTTGTGACGTCAGGCATCAAATAGGAGCCTTTGAAGAAGCTTTCAAGAAACATGAACTCAGATTTGGACAAGAAAGTGACAGAGTTAGAAGATGGAGAAACGCGTTAAAACAAGTTGCCAGTTATTCAAATTGGAACTCTGAACAATTCAAGAACGAGGCCATACTCGTTGAAAGTATTGCTCAACATATACATGAAAGATTGATTATGAAATTACCATCTTCTATGAAGAATCTAGTAGGGATTGATTCAAGGTTGGAACAAGTTGTTAGACACATTGGTCTTGGGGGGAATGATGTTCGCTTCATTGGCATATGTGGAATGGGTGGCATAGGTAAGACAACTATTTCTAGAAGAGTCTATGAAACCATTAGAAGTGAATTTAAAGCTAGTTGCTTTCTTCCCAATGTAAGAGAGACATGTGAGAAAAGAGGTATTGTTCAAATCCAGAAACAACTTCTTGATCGTACGAACATAAATTCTGATACTAGTTTCCACGATGAGTTTGAGGGAAAAGCTATAATTTGTGACTCTTTGTGCCACAAGAAGGTCCTTCTAGTTCTCGATGATGTAGACGATGGAGGCTTATTGGAGAATTTGGCTGGTGAAAAAGATTGGTTTGGTCCTGGAAGCAGAATAATAATCACAACTAGAGATAAACATGTACTAGAAGTGCACGGAGCAGTCAATAGAATTTGTAAGGTTGAAGGGTTAGAGCAAAATGAAGCACTTGAACTCTTTTGTTTGAAAGCTTTTAAAAGGCCAAAACCTGAAAAAGGGTATATGGATTTGTCCAAAGAAGTGGTTGAGTATTGTGATGGTCTTCCGTTGGCACTCGTAGTATTGGGTTCCCATCTTTGTGGACAAACCATTGATGTTTGGCGCAGTGCTATTGAGAAAATAAAGAGCTTTCCTCATGACAAAATTTTTAATACATTGAAAATAAGTTATGATGGTTTAGATCATTCGGAAAAGAATATCTTTTTAGATATCGCTTGCTTTTTCAAAGGACGTGAGAAAGATTATGTAACAAATATATTGAGAAGGTGTGGTTATCATGCTGAAGCTAGCATTTCTGCTTTAATAAATAAATCTTTGCTCAGTATAATAAATGATGATAAGTATGCCGATATGTTGGGGATGCATGATCTGCTTGAAGATATGGGCAAACATATTGTAATTCAAGAGTCTCGTGATGATCCTAGCAGGCGAAGTAGATTGTGGTCTTACACGGATGTTGATCTTGTACTTGCACAAAACAAGGAAAATGAAGCAACTCATAGCATCGTTCTATATAATATGTACTCGGAGATTGAAAGAAATTGGGGAGATTTGGATATAAGAGATTTATCTTTCTCAAATATATTCAAGCTAAAGCTTCTCATTTTAGATGGTGTGAAAGTTCCCATTCTCTGCGATATTCCTTGTACATTAAAGGTTTTGCACTGGAAAGGTTGTCCAATGGAAACTCTGCCCTTTACAGATCGAAGATATGAACTTGTTGAAATTGATTTGTCTTATAGCAAAATTGTACAGTTATGGGATGGAAAGAAGGTTCTAAGACTGTTACAGCACTTGAATCTATCCTTCTGTGACAAGCTGAAGCAAACGCCAGATCTTTCTGGGGCGCCCAATCTTAAAACACTTAATCTTCATAGATGTGAGGAGCTGAATTATATTCATCCATCTCTCGCACACCACAAAAGCCTTGTTGAATTGAATTTAATGAACTGTAAGAGTCTTGAAACACTTGCTGATAAATTGGAGATGAGTTCACTCGAAAAACTATATCTGTTCTCCTGCAGTAGTTTGAGAAGACTGCCAGAATTTGGGAAATGCATGAAACAGTTATCGATTCTTAATCTGACACTTACAGGTATAGAAGAGTTACCGACGACGCCTGGAAGGTTGGGTGGCGTATCTGAGTTGGACTTGAGTGGATGCAGAAAGCTTACTAGTCTTCCCTTATCACTTGCATGTTTCGTTGGCCTAAAGAAGTTAGAGTTAAGTAGATTTGTGGAGCTTAGTTGTGTTCCATACAGCACTCATGGGTTAGAGTCCCTCACAGCTTATGATAAGTCTGACAACCCAAATATAGTTGGACTTTTGTGTTCTCTCTCTCGCCTCACCTCTTTGAGTACCCTGAAATTACGCCGATGTTTTCCCACTTCTAGAAAAGAGTCGACCATTTGCTACAATCTTGGCCACTTAACGTCGTTGACGGATTTGGATTTATCGCGCAACTATTTTTTAAGAGTTCCAATAAGTATCCATGAACTTCCCAGGCTTACACGTCTGAATCTAAATGATTGTCGTTTTCTGAAGGTTTTACCAGAGCTTCCATCAAGTTTACGAGAATTACAGGCACAGCGTTGTCATTCACTGGATGCATCCAACGTGAATGATGCGATATCAAAGGCGTGTTGTGGCTTTGCAGAATCAGCTAGCCAAGATCGTGAAGATGTCTTGCAAATGTTGATCCCTGGGAAGGAAATTCCAGCTTGGTTTGAGCATCAGGAACAAGATGATGGAGTATCAGTGTCATTCCCGCATAATTGCCCTTCAACTGAAATCATGACGCTTGCTCTCTGTTTCCTATTAGATGGCTTCACGTTCTTACAAGGACAGCCATCGGTGGTCTGCAACGGTAAAGAATTCATCAACACGAGTTTATTGAAGATGTCGCCGGGGACATCTTCTAAGCAATTGTTCATTGTCTGCCTGAACGGTTTCTGTTTTAGTGACCAGTTATGCCAAGACAATCGCTTCCAAATGCTAGTTCCCAGTTGTGGTTACTTTAATAATATCCGAGTGCTTAGCTCTGGAGCATGTTGGGTGATTAAGCAAGACATTGAAAGTTTCAAGAAAAGAAAATCCCAAACAGGGAAAAGGAAAGCAACTCTTGAACTGGATATTGACATGATCTCACATTCTTCACCTTCCAGGAAGAAGATGTTGGTGGTTGCCCCTCCACTGTATGAAGAAGAGGAATAG 3348 0.3993 MASFVGDEASSSSLMPRPCTYKVFLSFRGKDTRKGFTSHLYAALVNRGITTYIDDKNLRKGDLISDELLIAIEESMFGVIVLSPNYASSRWCLDELQKIVECNNNLGLQIVAVFYHVKPCDVRHQIGAFEEAFKKHELRFGQESDRVRRWRNALKQVASYSNWNSEQFKNEAILVESIAQHIHERLIMKLPSSMKNLVGIDSRLEQVVRHIGLGGNDVRFIGICGMGGIGKTTISRRVYETIRSEFKASCFLPNVRETCEKRGIVQIQKQLLDRTNINSDTSFHDEFEGKAIICDSLCHKKVLLVLDDVDDGGLLENLAGEKDWFGPGSRIIITTRDKHVLEVHGAVNRICKVEGLEQNEALELFCLKAFKRPKPEKGYMDLSKEVVEYCDGLPLALVVLGSHLCGQTIDVWRSAIEKIKSFPHDKIFNTLKISYDGLDHSEKNIFLDIACFFKGREKDYVTNILRRCGYHAEASISALINKSLLSIINDDKYADMLGMHDLLEDMGKHIVIQESRDDPSRRSRLWSYTDVDLVLAQNKENEATHSIVLYNMYSEIERNWGDLDIRDLSFSNIFKLKLLILDGVKVPILCDIPCTLKVLHWKGCPMETLPFTDRRYELVEIDLSYSKIVQLWDGKKVLRLLQHLNLSFCDKLKQTPDLSGAPNLKTLNLHRCEELNYIHPSLAHHKSLVELNLMNCKSLETLADKLEMSSLEKLYLFSCSSLRRLPEFGKCMKQLSILNLTLTGIEELPTTPGRLGGVSELDLSGCRKLTSLPLSLACFVGLKKLELSRFVELSCVPYSTHGLESLTAYDKSDNPNIVGLLCSLSRLTSLSTLKLRRCFPTSRKESTICYNLGHLTSLTDLDLSRNYFLRVPISIHELPRLTRLNLNDCRFLKVLPELPSSLRELQAQRCHSLDASNVNDAISKACCGFAESASQDREDVLQMLIPGKEIPAWFEHQEQDDGVSVSFPHNCPSTEIMTLALCFLLDGFTFLQGQPSVVCNGKEFINTSLLKMSPGTSSKQLFIVCLNGFCFSDQLCQDNRFQMLVPSCGYFNNIRVLSSGACWVIKQDIESFKKRKSQTGKRKATLELDIDMISHSSPSRKKMLVVAPPLYEEEE* 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3475 1115 Gene3D - 19 186 IPR035897 -
Amo14g3475 1115 Gene3D - 355 439 IPR042197 -
Amo14g3475 1115 Pfam C-JID domain 945 996 IPR045344 -
Amo14g3475 1115 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 163 IPR035897 -
Amo14g3475 1115 Pfam TIR domain 21 196 IPR000157 GO:0007165
Amo14g3475 1115 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 18 985 - -
Amo14g3475 1115 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 985 IPR044974 GO:0006952
Amo14g3475 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 449 IPR027417 -
Amo14g3475 1115 Gene3D - 187 353 IPR027417 -
Amo14g3475 1115 SUPERFAMILY L domain-like 499 907 - -
Amo14g3475 1115 SMART till_3 20 160 IPR000157 GO:0007165
Amo14g3475 1115 Gene3D Ribonuclease Inhibitor 530 705 IPR032675 -
Amo14g3475 1115 PRINTS Disease resistance protein signature 753 769 - -
Amo14g3475 1115 PRINTS Disease resistance protein signature 220 235 - -
Amo14g3475 1115 PRINTS Disease resistance protein signature 296 310 - -
Amo14g3475 1115 PRINTS Disease resistance protein signature 390 404 - -
Amo14g3475 1115 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Amo14g3475 1115 Pfam NB-ARC domain 205 425 IPR002182 GO:0043531
Amo14g3475 1115 Gene3D Ribonuclease Inhibitor 846 926 IPR032675 -
Amo14g3475 1115 Gene3D Ribonuclease Inhibitor 706 845 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3475 Amo-Chr14 137958966 137963199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3475 198 812 WRKY Transcription Factor Family AT5G45050 32.018 2.24e-79 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3475 - - ahf:112797503 1370.14