Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3467 ATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGACTGCAAGTTTTTCTACAAGAGTTCGAAGCAAAAATAGGGAGGGAAACGACATTAAGAATCAATTGATTACATGTAGCAGAGAGAGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACCAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTTAGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCTTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACAATAGAGAATAACGAGGAGGCCGATCTCTATGAAGACCGTCATATATGGGTTCCAATCTATCTGGATCTCCACTTCTGGGCAGGGATGAGAAGCACACAAAGGAGCGAGAGCATGCATTCATTTTTTAACAAGTTTATTACCCGGAACAGCTCGCTTATTCAATTCGTCAAACAATACGATAATTGCCTCGGAAGCAGGGAGCAAGCAGAGAGAGAATCAGATGCTGCAGATTTCCATACGGTCATACCGTGTGCAACCAAATCCTCTGTTGAAGCTCAGTTTCAAGATGTGTACACTCATCAAAAGTTTAGGGAAGTGCAAGCACAATTCAGAGGAAAGGTGAATTGTATCACTAGATTAATGAATTCCGCTCTAGGCTATTCAGTATACGAAGTCGGAGAACAAGTTTCCAGCTCAATATTCAACAAGTTTGTGGTTACTTACGACTCAGTAGTAGCTGAGGTAAAATGCCAATGCTTATTATTCGAGTTGAGAGGGATACTGTGCCGTCACGCACTAAGCGTGTTAAGCTTTGAACGAGTAAGCCAAGTGTCACCGAGATATATACTGGAACGATGGAGCAAGAAGGTAAAGAGGCGACACACACACATCAAAAGCAGCCATGACGAGCCACTGTTGGAGCCAAGAAGCAAGAGGTTTGACCAATTTGTTTTTCGTTCGCAAAATATTTGTGAATTTGCATCCGAATCTGAGGAGCTGACTGCAATTCTGCACCGTGCGTACGATAACGTAATGGCTGAGATGGAATCATTCAAAGCCAAAAGGAAGGGCACATATTCTTTATCTCACGAAGACGCCAACTTGGAATCCGTTAACGAGCTTCAAAGCCCCCCAAAGATTTGA 1212 0.429 MTFTTLEDAGKFYRNYAKTASFSTRVRSKNREGNDIKNQLITCSRERKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVSAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSIRRTIENNEEADLYEDRHIWVPIYLDLHFWAGMRSTQRSESMHSFFNKFITRNSSLIQFVKQYDNCLGSREQAERESDAADFHTVIPCATKSSVEAQFQDVYTHQKFREVQAQFRGKVNCITRLMNSALGYSVYEVGEQVSSSIFNKFVVTYDSVVAEVKCQCLLFELRGILCRHALSVLSFERVSQVSPRYILERWSKKVKRRHTHIKSSHDEPLLEPRSKRFDQFVFRSQNICEFASESEELTAILHRAYDNVMAEMESFKAKRKGTYSLSHEDANLESVNELQSPPKI* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3467 403 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 124 365 IPR031052 GO:0006355
Amo14g3467 403 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 108 IPR031052 GO:0006355
Amo14g3467 403 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
Amo14g3467 403 Pfam SWIM zinc finger 261 293 IPR007527 GO:0008270
Amo14g3467 403 PANTHER OS03G0843700 PROTEIN 124 365 - -
Amo14g3467 403 PANTHER OS03G0843700 PROTEIN 1 108 - -
Amo14g3467 403 SMART 26again6 271 298 IPR006564 GO:0008270
Amo14g3467 403 ProSiteProfiles Zinc finger SWIM-type profile. 260 296 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3467 Amo-Chr14 137876261 137879103 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo14g3467 FAR1 1.6e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3467 - - adu:110280503 523.087