Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3466 ATGGCATCCAAGTCCTCTTCTGGTTCAATTCCACCACCACCAAGAGCATGCACCTATCACGTGTTCTTGAGTTTCAGGGGTGAAGATGCTCGCGGACGATTCACTAGCCATCTCTATGACGCCCTCAACAGAAAGGGAATCACAACCTACAGAGATGATAACAATCTTCGCAAGGGTAATGTTATTTCAGATGAACTCCTCAAAGCAATTGAAGAGTCTATGTTTGCAATCATAGTTCTGTCACCAAACTACGCTTCATCCACATGGTGCTTGGATGAGCTCTGCAAGATCCTTGATTGCAAGAACAAGCTGGGGCTACAAATGGTGACAGTGTTCTACGGTGTGGAACCTTCTGTTGTGAGGCACCAAATAGGAACCTTTCAGAAAGCTTTCAAGAAGCACAAAAAGAGACACGACCGTGAGAAGGTTCAAAGATGGAGGGAAGCGTTAAAACAAGTTGCTGATTATTCTGGATGGACCTCAYAAAATCAAGATGAGGCAGTACTTGTGGAAAAAATTGCTCAACATATCCATGAAATATTGATTCCGAAGTTGCCCCCTTCAATGAAGAATCTTGTAGGAATTGATTCAAGAGTCGAAGGAGTGATTAATCTCATAGGTCTTGGGTTGAATGATGTTCGCTATATGGTTATATGGGGAATGGGAGGCATAGGTAAAACGACTATTGCTAGAGCTGTCTTTGAAACCATTCGAAGTAGATTTGAAGTTAGTTGCTTTCTTGCCGATGTAAGGGAGCATTGTGAGAAAAAAGATACTGTCCACATTCAAAAGCAGCTGCTTGATCAAATGAATATAAGTTCATATGCTGTTTATAACAAGTATGACGGGAGGAGAATAATTCAAAACTCTTTATGTCTCAAAAAGGTACTTCTTGTTCTTGATGATGTAAATCATGAAAAACAATTAGAAGATTTGGCTGGGGAAAAAGATTGGTTTGGTCCTGGAAGCAGAATAATAATTACAACTAGAGACGTAGAGGTGCTAAAGGGACCAGAGGTGCATGAAATTTATAAGGTTGAAGGGTTAGTGGAAAGTGAAGCCCTTAACCTCTTTTGTCTGAAAGCCTTTAAACAGCAGGAGCCTACAGAAGGGTTTTTGGATTTGTCTAAAGAAGTGGTCAAGTACAGTGGTGGTCTTCCATTGGCACTTAAAGTATTGGGTTCCTATCTTAATGGTAGACCTACTATTGCGGTTTGGTATAGTGCTATTGAAAGAATAAAGAAGACTTCACATTCTGAAATTATTGATAAAGGAAATTTTTTAGATATTGCTTGTTTCTTTAAAGGAAGGCAGAAACATCATGTAACAGAGATGTTAAAAAGATGTGGTTATCAGGCTGAAATCGGTCTTGATATTTTGATTAATAGATCATTGGTCACATTAGAGGAGGTTAAGATACTCGGGATGGTTACTCTGGGGATGCATGATCTGCTTGAAGAAATGGGCAAACAAATTCGTAGCAGATTGTGGTGTTATGAGGATGTTGATTTTGTACTTACTCAAAAGAAGGAAAGTGAAGCAACTCATAGCATCGTAAGTAAGGTGTATTATTGCGAGACAGAAGAGGAATGGAGAGAGTATCGGGAGATTAAAGAGAATTGGAGAGATTTATCTTTCTCAAATATATGCCAGCTAAAACTTCTCATTTTAGATGGCGTGAATGCTCCCATTCTCTGTGATATTCCTTGTACATTAAAGGTTTTGCACTGGGAAGGTTGTCCAATGGAAACTCTACCCTTTACAGATCAATGCTATGAACTTGTTGAAATTGATTTATCTCATGGCAAAATTGTAGAGTTATGGGATGGAAAGAAGGTTCTGAAAAAGTTAGAACACTTGAATCTGTACTTCTGTGAGAAGCTGAAGCAAACGCCAGATCTTTCTGGGGCTCCCAATCTTAAAACACTTAATCTTCATGGATGTAAGGAGCTGAATTATATTAATCCATCTCTTGCACACCACAAGAGGCTTGTTGAATTGAATTTAGGTAGATGTAGGAGTCTTGAAACACTTGGAGATAAATTGGAGATAAGTTCACTCGAGAAACTAAATCTATATGAGTGCCGTAGTTTGAGAAGACTGCCAGAATTTGGGGAATGCATGAAACAGTTATCGATTCTTGATCTGGAAAAAACAGGTATAGAAGAGCTACCCCCAACGCTTGGAAAGTTGGCTGGCGTGTCTGAGTTGGACTTAACTGGGTGCCACAAGCTTACTAGTCTTCCCTTCCCACTTGGATGTTTCGTTGGCCTAAAGAAGTTGAAGTTGAGTAGATTCGTGGAGCTTAGTTGTGTTCCATACACCACTCATGGGTTAGAGTCCCTCGAGGCTTGGGATTTTTCTAACAGCCCAATTTTTGTTGGACTTTTGTGTTCTCTCTCTCGCCTGACCTCTTTGAGTAGCCTAAAATTACATGGAGAGTATAGCAGATCTAGAGAAGTGTCGACCCTTTACTATGATCTTGGCCACTTAACGTCGTTGACGGATTTGGATTTAGGGTACAGTGATTTTTTAAGAGTTCCAATAAGTATCCATGCACTTCCCAGACTTACACGTCTGGATCTATGTTATTGCTATAATTTGGAGGTTTTGCCAGAGCTTCCATCAAGTCTAAGAGAATTACAGGTAAAGGGCTTTGAACCACTGGTTGCATCCAATGTAAATGCTGCTATATCAAAAGCGTGTTGTGGCTTTGCAGAATCAGCTAGCCAAGATCGTGAAGACCTCTTGCAAATGTGGATCAGTGGGAAGGAAATGCCAGCATGGTTTAAGGATCAGAAAAAAGATAACGGAATATCAGTCTCATTCCCCCATAATTGCCCTTCAACTGAAACCATCGCACTTGCTCTCTGTTTCCTATTACAAGGTGTCATCATGGACTTGCCGGAACAGCCATCGGTTATCTGCAATGGTAAAGAATTCATCAACAAGAGTGTATTTCATGTGGTTTTGCCTCTCAAATCTAAGTATTTGTGCATTGTCTGCGTGAATGGTTACTATTTTAGTAACATGTTATGCCAAGACAATCGCTTCCAACTGCAATTTCCCAGTGATTATCGTGGAATCCGAGTACAAAGATCTGGAGCACGTTGGGTGTGCAAGCAAGACATTCAACATTTCAAGCAGTTTGGCATCTCGTAG 3162 0.4032 MASKSSSGSIPPPPRACTYHVFLSFRGEDARGRFTSHLYDALNRKGITTYRDDNNLRKGNVISDELLKAIEESMFAIIVLSPNYASSTWCLDELCKILDCKNKLGLQMVTVFYGVEPSVVRHQIGTFQKAFKKHKKRHDREKVQRWREALKQVADYSGWTSXNQDEAVLVEKIAQHIHEILIPKLPPSMKNLVGIDSRVEGVINLIGLGLNDVRYMVIWGMGGIGKTTIARAVFETIRSRFEVSCFLADVREHCEKKDTVHIQKQLLDQMNISSYAVYNKYDGRRIIQNSLCLKKVLLVLDDVNHEKQLEDLAGEKDWFGPGSRIIITTRDVEVLKGPEVHEIYKVEGLVESEALNLFCLKAFKQQEPTEGFLDLSKEVVKYSGGLPLALKVLGSYLNGRPTIAVWYSAIERIKKTSHSEIIDKGNFLDIACFFKGRQKHHVTEMLKRCGYQAEIGLDILINRSLVTLEEVKILGMVTLGMHDLLEEMGKQIRSRLWCYEDVDFVLTQKKESEATHSIVSKVYYCETEEEWREYREIKENWRDLSFSNICQLKLLILDGVNAPILCDIPCTLKVLHWEGCPMETLPFTDQCYELVEIDLSHGKIVELWDGKKVLKKLEHLNLYFCEKLKQTPDLSGAPNLKTLNLHGCKELNYINPSLAHHKRLVELNLGRCRSLETLGDKLEISSLEKLNLYECRSLRRLPEFGECMKQLSILDLEKTGIEELPPTLGKLAGVSELDLTGCHKLTSLPFPLGCFVGLKKLKLSRFVELSCVPYTTHGLESLEAWDFSNSPIFVGLLCSLSRLTSLSSLKLHGEYSRSREVSTLYYDLGHLTSLTDLDLGYSDFLRVPISIHALPRLTRLDLCYCYNLEVLPELPSSLRELQVKGFEPLVASNVNAAISKACCGFAESASQDREDLLQMWISGKEMPAWFKDQKKDNGISVSFPHNCPSTETIALALCFLLQGVIMDLPEQPSVICNGKEFINKSVFHVVLPLKSKYLCIVCVNGYYFSNMLCQDNRFQLQFPSDYRGIRVQRSGARWVCKQDIQHFKQFGIS* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3466 1053 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 617 IPR044974 GO:0006952
Amo14g3466 1053 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 686 771 IPR044974 GO:0006952
Amo14g3466 1053 SUPERFAMILY "Winged helix" DNA-binding domain 415 506 IPR036390 -
Amo14g3466 1053 PRINTS Disease resistance protein signature 290 304 - -
Amo14g3466 1053 PRINTS Disease resistance protein signature 682 698 - -
Amo14g3466 1053 PRINTS Disease resistance protein signature 383 397 - -
Amo14g3466 1053 PRINTS Disease resistance protein signature 215 230 - -
Amo14g3466 1053 Gene3D Ribonuclease Inhibitor 818 899 IPR032675 -
Amo14g3466 1053 Gene3D Ribonuclease Inhibitor 684 817 IPR032675 -
Amo14g3466 1053 Gene3D - 181 342 IPR027417 -
Amo14g3466 1053 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 686 771 - -
Amo14g3466 1053 Pfam TIR domain 19 179 IPR000157 GO:0007165
Amo14g3466 1053 SUPERFAMILY L domain-like 544 885 - -
Amo14g3466 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 423 IPR027417 -
Amo14g3466 1053 Gene3D - 348 430 IPR042197 -
Amo14g3466 1053 ProSiteProfiles TIR domain profile. 17 181 IPR000157 GO:0007165
Amo14g3466 1053 Pfam NB-ARC domain 212 418 IPR002182 GO:0043531
Amo14g3466 1053 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 159 IPR035897 -
Amo14g3466 1053 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 617 - -
Amo14g3466 1053 Gene3D - 16 180 IPR035897 -
Amo14g3466 1053 Gene3D Ribonuclease Inhibitor 532 683 IPR032675 -
Amo14g3466 1053 SMART till_3 18 156 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3466 Amo-Chr14 137855741 137866692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3466 12 809 WRKY Transcription Factor Family AT4G12020 27.962 1.10e-77 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3466 - - adu:107485881 1390.56