Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3460 ATGAAGATCTTTCTTTCTTTAAGGACATTGTCCTTTCTATGTTGCCTTCTCTTCGCTGCTAGTAACTTAGCATTTGAATCACACGCTTCAGTAACTTCGCAGGAGTTCCAATACTTCTGTGATGAGCATAGCATTACCATAGACATTGAAGGCAACTACACAACCAATAGCACCTACCATACCAACTTCAACACTCTTATGTCAAATATTCTCAACAACAAAAAAATCGATTACGGTTTCTACAACGTCTCATACGGCGAGTACCCAAACAGAGTGTACGCCATTGGACTATATAGAGGAGACATTAAGCCGGAGCAGTGCCGAACTTGCCTAAACCAATCCAGAGCCAATCTCACGGCGGTTTGTCCGAATCGCAAGGTGGCTATCGGGTGGTACAACGACGAACTATGCATGCTGCGATACTCGAACCGCAGCATATTCGACCGGATGGACAATGGACCGGCTTATTACAAGAAAAGCGACAAAAATGCCACGGATTTGAATGAGTTCAATATAAAATTGAACGATTTGTTGAATGGCTTAAAAAGCAAAGTTTCTTCTGGTGACTCTCGATTAAAGTATGCTGTGGGAAACTTTAGTCTTCCCAATTTTGATGATGTTTATGGTCTTGTTCAGTGCACGCCTGATTTGTCTGGAGAAGATTGTGATAACTGCATAGCTCAATCTATTGAAAGAATATCAAAAGATTGTTGTAAGGATAGCATGGGTGGTAGGGTTGTTAGGCCAAGTTGTTTTATGAGATTTGAGACATCGTATCAATTGTATGGGCCAACGGCGTATACGCCACCTTCGCCGCCAGCATCTCCGCCGCCCACCACCACCTCTGTAACTAACCCGTCTTCAGGAGGAAAGAGCCACACTTCAATACTAGTCATCGCCATAACAATACCTATAGTGGCTGTGATTATGTTCATGTTTATTTTTATTCGCAGCAGGTATCTAAGAAAGAGGAAGCAAAGGAAAAGCAATTCAAGTGAATATGAAATTGTTGTAGTCATTAATTTTAAGTTGGAGAGTATACGAGACGCTACAAATGACTTTTCTGATGCTAATAAGCTTGGACAAGGTGGATTTGGGGCTGTTTACAAGGTCAGTTATAGTAGTAATATAGATAGGTTGGTAAGGAGTTCTGGTCAAGGAGACCTAGAATTTAAGAATGAAGTGTTGTTACTGGCTAAGCTTCAACATCGAAATTTAGTTAGCCTACTTGGTTTTTGTTTGGAAGGAAGGGAAAGGTTACTCGTCTATGAATTTGTATCCAATAAAAGTCTTGATTACTTTATATTTGATCCCAGCAAGAGAGCAAATTTGAATTGGGAAAGCTGCCACAGAATCATTGGAGGTATTGCTCGAGGCCTTGTCTACCTTCATGAGGATTCTCGATTGCGTATTATTCATTGTGATCTCAAAGCAGCAAATATTCTTTTAGATGAAAAGATGAATCCTAAGATATCAGATTTTGGTACTGCGAAACTATTTGTTACAAGTCAAACTCACTCTAATACAAATAGAATTGTTGGAACTTATGGATATATGGCACCTGAATATCACACTGTTTTCTCATTATGCCTTCCTTATCTATTTGCATGGAGAAATTGGAAGGATGGGACAATTTCAAACATTGTAGATACCTCATTAAGAAATAGTTCACAGAATAAAATAATAAGATTCATCCACATTGCTTTACTATGTGTTCAAGCAAATGAAGCTGATAGACCAACCATGGCTACAGTTTTACTCATGCTTAATAATCATTCGGTCACACTTGCAGTACCTTCAGAACCTGCATTTTTGCTGAATACAGGATCAAACACATCGACAAAAGGACCAGCACAAGAATCAGTCAATAAAGCCTCAATTACTGATCCATATCCTCGCTAG 1902 0.3943 MKIFLSLRTLSFLCCLLFAASNLAFESHASVTSQEFQYFCDEHSITIDIEGNYTTNSTYHTNFNTLMSNILNNKKIDYGFYNVSYGEYPNRVYAIGLYRGDIKPEQCRTCLNQSRANLTAVCPNRKVAIGWYNDELCMLRYSNRSIFDRMDNGPAYYKKSDKNATDLNEFNIKLNDLLNGLKSKVSSGDSRLKYAVGNFSLPNFDDVYGLVQCTPDLSGEDCDNCIAQSIERISKDCCKDSMGGRVVRPSCFMRFETSYQLYGPTAYTPPSPPASPPPTTTSVTNPSSGGKSHTSILVIAITIPIVAVIMFMFIFIRSRYLRKRKQRKSNSSEYEIVVVINFKLESIRDATNDFSDANKLGQGGFGAVYKVSYSSNIDRLVRSSGQGDLEFKNEVLLLAKLQHRNLVSLLGFCLEGRERLLVYEFVSNKSLDYFIFDPSKRANLNWESCHRIIGGIARGLVYLHEDSRLRIIHCDLKAANILLDEKMNPKISDFGTAKLFVTSQTHSNTNRIVGTYGYMAPEYHTVFSLCLPYLFAWRNWKDGTISNIVDTSLRNSSQNKIIRFIHIALLCVQANEADRPTMATVLLMLNNHSVTLAVPSEPAFLLNTGSNTSTKGPAQESVNKASITDPYPR* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3460 633 MobiDBLite consensus disorder prediction 266 280 - -
Amo14g3460 633 SUPERFAMILY Protein kinase-like (PK-like) 330 589 IPR011009 -
Amo14g3460 633 Gene3D Phosphorylase Kinase; domain 1 315 425 - -
Amo14g3460 633 Pfam Protein kinase domain 355 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3460 633 MobiDBLite consensus disorder prediction 608 633 - -
Amo14g3460 633 ProSiteProfiles Protein kinase domain profile. 354 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3460 633 Gene3D - 154 259 IPR038408 -
Amo14g3460 633 Gene3D - 44 145 IPR038408 -
Amo14g3460 633 ProSiteProfiles Gnk2-homologous domain profile. 152 260 IPR002902 -
Amo14g3460 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Amo14g3460 633 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 524 - -
Amo14g3460 633 ProSiteProfiles Gnk2-homologous domain profile. 41 146 IPR002902 -
Amo14g3460 633 SMART serkin_6 354 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3460 633 Pfam Salt stress response/antifungal 51 143 IPR002902 -
Amo14g3460 633 Pfam Salt stress response/antifungal 160 257 IPR002902 -
Amo14g3460 633 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 524 - -
Amo14g3460 633 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 535 611 - -
Amo14g3460 633 MobiDBLite consensus disorder prediction 266 292 - -
Amo14g3460 633 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 535 611 - -
Amo14g3460 633 Gene3D Transferase(Phosphotransferase) domain 1 532 597 - -
Amo14g3460 633 Gene3D Transferase(Phosphotransferase) domain 1 426 531 - -
Amo14g3460 633 MobiDBLite consensus disorder prediction 608 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3460 Amo-Chr14 137781970 137786444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3460 7 633 Receptor kinase-like Gene Family AT4G21410 42.319 1.47e-161 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo14g3460 Pkinase 6.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3460 - - adu:107463438 1143.64