Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3439 ATGATGTGTAGTGGTGAGCCTTTGGATTTGTATAAGCTATTCATGGTGGTGAAGGAGAAAGGTGGCTATGATGCTGTTTGTAAGAATATGCTGTGGGATTTGGTTGCGGAAGAATATGGTTTAGGTTTAAATGTTGGTTCATCTATTGAACTTGTTTATAGTAAGCACTTGAGTACACTAGAGACATGGCTGAAGAATGTTGCTGATAGTAAGTTCCCTGAGTGTGGTTTAATGGATGATAGGGTTAGTTTTGGTAAGAAGTTGATGGAGGTGCAGGCTGATTTCTTGTTAGATGTTTATAGCGAGGAAGGTGCAGGGGATAAAATTAAGACAGCATGTGATTTCGTGGATGGAAGGAAGTTGTGTGGAACTAATAGGGTTAGGGGATTGAATCCTGAGCTCAGCGGTGCAAAGAAAATTGTTGATTTGAATGCACTGGACCATAAGATGAATGGGCCTAGTATTGGAAGCTTTTGCAGCAATAACTTTTCAAATAATTCAAGTGATATACAGAACCATTTGAATGAAATTAAGACATCAACAGTGGACATATCTGATGAAGCAAACATAATGCCTACATTGTCGGAAGAAGGTGATAGTTGTGATAAAAATGATGGTCATGACGACGACGACGATGTGATGGTATTGGATCCATCCGATAGTTGTGATAAAAATGATGGTCATGACGACGACGACGACGATGTGATGGTATTGGATCCATCCACTGTTAATAAAGAGAGCTTTGGTCGAAAGAGGAAGAGAGAGTCTATGTCTGAAATGCTAAGCTGGCTTACTGGTATTGCTAAGAATCCTTGTGATCCTGCAGTTGGTTCAATGCCCGAAAAGTCAAAGTGGAAGTCTTATGGTAGTGAGGAGATTTGGAAGCAGGTTTTGCTGTTTCGGCAAGCCACCTTTTTTAGCAGTGATCACGTCAGTTGGCAGGGTCAGAAGATGCATCCTTGCATGTATGATGATCAGGTTGGGGCAAACTACAACCTTAGAGAGAGGTTGAAATCTGACAAGAATTTAACTTGTGGTGTCTCTTCAAATATGAGAGGAATACAGGGAGGTTCCGAGAGAAACCCAAGTCCTCATTCAGAAGTGGAGAAACTGTTACTTGACCAATGTAGCATGGTGCCCATTCCTGTTGGGCCATCCCATCAAGCTGAAGTGCCCGAATGGACTGGTGTGGCAATTGAAAGTGATTCCAAGTGGTTGGGAAGCCAAATATGGCCATCAGCAGAGATAAAGTCCAAAGTCATAGAAAGAGATCCTATCGGAACAGGAAGGAAAGATTCATGTGGCTGTGAAGTACAAGGTTCTGTTGAGTGTGTCCGGTTCCACATTGCTCAGAAAAGGGCTAAAGTTAAGTTGGAATTGGGTGTGGCTTTTTATCTGTGGAATTTACACAAGACAGGCGAAGATGTTAGGCGATTGTGGACAGAAGACGATGAGAAGAAGTTCAAGGATGTGGTGAAATCAAACCCTCCTTCACTTGAAAAATGTTTTTGGGATCAAATTTTCAAATCATTTCCTACAAAGAGCAGGGAAGATTTAGTAAGTTACTACTTCAATGTCTTTATTTTGCAGCGCAGAGGATACCAAAATAGGAATACTCCGGATGACATTGACAGTGATGATGATGAATCAGAATATGGTCCATTGAAGAATGCTTTTGGACATCAAACACACAAATCGCGCAACATCACCTTATTGTCTCCCAAAAAGCCCAAGAAAACGGAACATAGCAAGTGA 1755 0.4142 MMCSGEPLDLYKLFMVVKEKGGYDAVCKNMLWDLVAEEYGLGLNVGSSIELVYSKHLSTLETWLKNVADSKFPECGLMDDRVSFGKKLMEVQADFLLDVYSEEGAGDKIKTACDFVDGRKLCGTNRVRGLNPELSGAKKIVDLNALDHKMNGPSIGSFCSNNFSNNSSDIQNHLNEIKTSTVDISDEANIMPTLSEEGDSCDKNDGHDDDDDVMVLDPSDSCDKNDGHDDDDDDVMVLDPSTVNKESFGRKRKRESMSEMLSWLTGIAKNPCDPAVGSMPEKSKWKSYGSEEIWKQVLLFRQATFFSSDHVSWQGQKMHPCMYDDQVGANYNLRERLKSDKNLTCGVSSNMRGIQGGSERNPSPHSEVEKLLLDQCSMVPIPVGPSHQAEVPEWTGVAIESDSKWLGSQIWPSAEIKSKVIERDPIGTGRKDSCGCEVQGSVECVRFHIAQKRAKVKLELGVAFYLWNLHKTGEDVRRLWTEDDEKKFKDVVKSNPPSLEKCFWDQIFKSFPTKSREDLVSYYFNVFILQRRGYQNRNTPDDIDSDDDESEYGPLKNAFGHQTHKSRNITLLSPKKPKKTEHSK* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3439 584 SMART sant 476 529 IPR001005 -
Amo14g3439 584 SMART bright_3 2 66 IPR001606 GO:0003677
Amo14g3439 584 Pfam ARID/BRIGHT DNA binding domain 4 60 IPR001606 GO:0003677
Amo14g3439 584 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 1 580 - -
Amo14g3439 584 MobiDBLite consensus disorder prediction 538 584 - -
Amo14g3439 584 CDD SANT 480 527 IPR001005 -
Amo14g3439 584 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 580 - -
Amo14g3439 584 Gene3D - 1 73 IPR036431 GO:0003677
Amo14g3439 584 SUPERFAMILY ARID-like 3 73 IPR036431 GO:0003677
Amo14g3439 584 CDD ARID 4 61 - -
Amo14g3439 584 SMART ELM2_2 381 431 IPR000949 -
Amo14g3439 584 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Amo14g3439 584 Pfam Myb-like DNA-binding domain 479 526 IPR001005 -
Amo14g3439 584 MobiDBLite consensus disorder prediction 193 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3439 Amo-Chr14 137523915 137529050 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Amo14g3439 ARID 8.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3439 - - adu:107485899 1084.32