Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3395 ATGGCAGAAACTGAGGATAAGAAACATGCTCCTCCTCCACCACCACCAACAGCAACAACTGAAGACGCCACCGTCGCCGCCGCCACCACCACCAACACCAACATAGCTCAACAAGCAAACAATAAATCCAGCAACAACAACATGGTGAGAAGGTTCATAGGGGTGAGGCAAAGGCCCTCAGGGAGATGGGTGGCAGAGATTAAAGACTCATCTCAGCATGTAAGATTATGGCTCGGTACCTATGATTCACCTGAACAGGCTGCTAGGGCTTACGATGAAGCTGCTAGAGCACTTCGTGGTGACAATGCAAGAACCAACTTTGCACCTCCCTCGTCTTCCTCATCACCGCCACTACCTCCTCCATCTCCAGGAAATAATAACAATAATAATAAGCATGGATTAAGCTTTGCCTCATTGAAAGCAAAGTTGAGCAAGAACTTGCAAAGCATCATGGCAAGGGCTAATCACAACAACAAATCTTCWTCATCAAAGAGTAGAGTGAGTGATCATTTCACCTTTGCTAGCATATTCAATCGCAATAGGAACAAYAATCATCATCAACAACATGCTCCTCCTCCTCCTATGGTAATAGATGTTAAGAACATTGACAAAGTGGTGCAACCTAGCATCATAGTACCACCACACAAGGACCAACATCATCAACATTATTATGAGCCTAATAACAACAACAACAACAACAATTGGGAAACTTCAAGTGTCTCTGATTGTAGCAACGAGTGGATCATAAACAATAATGGGTTGTTCCAAAAACATAGGTTGTTGTTGGATTCATCATCATCAGTAGGTTCTGATAATGATGGTGAGTTTGGTTGTGTTGGTGATCAAGGGGTTTTGGATCAACTAATGGGGTGGGTTGATAGCACTCAGATTAGTAGTAGTGATGAGGGTTTATCATCATCAAGGAGCAAAAGATTCAAGGTAKCTTCTTCAGTTCTTGTGCCACCAACTTTCACTGCTTCTTCTTCTCCTTCTCCTTATTATTATTATGATTGCGCTTCTCCATACACTAGTGCTTCTGGATCTCCATATAATGGTAATGGAAGTTATTATGGTTATGGTTATGGCTCCCCTAATTACTATGCCTCTCACTATAATAATAGTAATGATGGCAAATAA 1137 0.4195 MAETEDKKHAPPPPPPTATTEDATVAAATTTNTNIAQQANNKSSNNNMVRRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDSPEQAARAYDEAARALRGDNARTNFAPPSSSSSPPLPPPSPGNNNNNNKHGLSFASLKAKLSKNLQSIMARANHNNKSSSSKSRVSDHFTFASIFNRNRNNNHHQQHAPPPPMVIDVKNIDKVVQPSIIVPPHKDQHHQHYYEPNNNNNNNNWETSSVSDCSNEWIINNNGLFQKHRLLLDSSSSVGSDNDGEFGCVGDQGVLDQLMGWVDSTQISSSDEGLSSSRSKRFKVXSSVLVPPTFTASSSPSPYYYYDCASPYTSASGSPYNGNGSYYGYGYGSPNYYASHYNNSNDGK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3395 378 MobiDBLite consensus disorder prediction 125 139 - -
Amo14g3395 378 MobiDBLite consensus disorder prediction 22 49 - -
Amo14g3395 378 CDD AP2 51 108 IPR001471 GO:0003700|GO:0006355
Amo14g3395 378 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
Amo14g3395 378 Gene3D AP2/ERF domain 50 109 IPR036955 GO:0003700|GO:0006355
Amo14g3395 378 SUPERFAMILY DNA-binding domain 52 108 IPR016177 GO:0003677
Amo14g3395 378 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 304 - -
Amo14g3395 378 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 21 304 - -
Amo14g3395 378 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Amo14g3395 378 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Amo14g3395 378 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Amo14g3395 378 MobiDBLite consensus disorder prediction 95 139 - -
Amo14g3395 378 MobiDBLite consensus disorder prediction 1 49 - -
Amo14g3395 378 Pfam AP2 domain 51 100 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3395 Amo-Chr14 136490570 136492456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3395 37 108 AP2-EREBP Transcription Factor Family AT5G19790 62.500 9.69e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Amo14g3395 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3395 K09286 - gmx:100799444 258.455