Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3340 ATGGCAACTGATATGCAGAGGCTTATTGGAACCAGCGAAGATGATGATGAAGAAATAGAGATGGATGTGAAAGAAGAGGATGATGAGGATGGAGATGAAGAGGAAAATGGAGGTGATCATGGAAATGCTTCGGAGATGGTAGGGATTGATGGTGGGAATGGTTTAGTTACTGCTGGTGGTGACAACAGTTTTCAACAGCAACAGCAGTTTCAAGAACAAGTTGGAACCCCAGGTGGATCTGCTCGAAGATGTAGACCACTAGAAGAGAAAGAACGGACAAAGCTAAGAGAGAGGCGCCGGAGGGCTATCACCGCTAAGATCTTGGCAGGGCTTCGCAGGCATGGCAACTACAATCTTAGAGTTAGAGCAGACATAAATGATGTTATTGCTGCTTTAGCAAGAGAAGCTGGGTGGGTGGTTCTTCCTGATGGCACTACTTTTCCTCCAAGATCCCAGGGTCAAAGGCCAACTGGTGGTAATTCTGCAGTTGTCACTCCATCTTCTCCAGTGCCTTCACAACCAACTCCATCTGCTTCCATCAGGGGAGTTGCTTCTGGCTATAGGAGCTCATTAGAGTATAATACATGTCAAACAAAAGGTGTTTTCATGCCAACTCCATCTCCTTATGATCTATCCTCAAGTTCCCGGTCTCAAACATCCATGGTGGGGGATGGAGAGTTACAGAGAGACAATCAACCTTTGGTTGGCAGTGGTTCAATGGATACTGTTCATGAGAAGCAGATTATTGACTTGCCCTGCAGATTATCAGAGCGTGATCTGGCCGGTACTCCATATGTTCCAGTGTATGTGATGCTACCGTTAGGAGTGATCAATATAAAGTGTGAGCTTGTTGATCCGGATGGTCTACTAAAGCAGCTGAAAGTATTGAAATCAATAAACGTTGATGGTGTTACAGTTAATTGTTGGTGGGGAATAGTAGAAGCACATGCTCCACAAGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAGATGGTGCATGAGCTGAAGCTTAAGCTGCAGGTTGTGATGTCGTTTCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGCATTCCTTTGCCCCATTGGGTTGCAGAAATTGGTAGGACCAATCCTGATATCTTCTTCACTGACAGAGAGGGAAGACACAACCCTGAATGTCTTTCTTGGGGAGTAGATAAGGAACGGGTATTAAGAGGTCGGACTGCTTTAGAGGTCTATTTTGATTTCATGAGAAGTTTCCGGGTAGAATTTGATGAGTATTTTGAGGATAGTTTCATCTCTATGATTGAAGTTGGACTTGGTCCGTGCGGAGAGCTAAGATATCCATCTTGTCCTGTAAAACATGGTTGGAGATATCCTGGTGTTGGTGAGTTCCAGTGCTATGATCAATACATGTTGAAAAGTCTCAAGAAAGCAGCTGAAGCACGGGGACACTCTATTTGGGATAGGGGACCAGATAATGCGGGTACCTATAATTCTCAGCCACACGAAACAGGTTTCTTTTGCGATGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTCCTTAATTGGTATTCTAAGGTTTTAGTTGATCATGGAAACGGGGTACTTTCTCTGGCAAAATTAGCTTTCGAGGGATCCTGCATTGCTGCAAAGTTGGCAAATATTTACTGGTGGTACAAGACTGCTAGTCATGCTGCTGAATTAACTGCTGGGTATTATAACCCATGTAATCGCGATGGCTATGTGGCTATTATGGAAATGTTAAAGAGCAATGGAGTTAGCTTGAACATTGCTTGTGCCGACTTGAACACATTGAACCAGCTTGAGGTCTTTCCAAAGGCATTCGCTGACCCTGAGGGATTAGTCTGGCAAGTATTGAATGCAGGTTGGGATCTTGGCTTACCAGTTGCCGGTGAGAATGCACTTCCTTGCCTAAACAGAGTTACCTATAACAAGGCTTTGGATAGTGCCAAACCCATGAATGATCCAGATGGAAGGCACTTTTCTTCCTTCACTTACCTAAGGCTTAGTCCATTACTTATGGAACAGCAAAACCTACGAGAGTTTGAACGATTTGTCAAGAGGATGCATGGGGAAGCTGTTCTTGATCTTCAGGTATAA 2112 0.4408 MATDMQRLIGTSEDDDEEIEMDVKEEDDEDGDEEENGGDHGNASEMVGIDGGNGLVTAGGDNSFQQQQQFQEQVGTPGGSARRCRPLEEKERTKLRERRRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPPRSQGQRPTGGNSAVVTPSSPVPSQPTPSASIRGVASGYRSSLEYNTCQTKGVFMPTPSPYDLSSSSRSQTSMVGDGELQRDNQPLVGSGSMDTVHEKQIIDLPCRLSERDLAGTPYVPVYVMLPLGVINIKCELVDPDGLLKQLKVLKSINVDGVTVNCWWGIVEAHAPQEYNWNGYKRLFQMVHELKLKLQVVMSFHECGGNFGDDVCIPLPHWVAEIGRTNPDIFFTDREGRHNPECLSWGVDKERVLRGRTALEVYFDFMRSFRVEFDEYFEDSFISMIEVGLGPCGELRYPSCPVKHGWRYPGVGEFQCYDQYMLKSLKKAAEARGHSIWDRGPDNAGTYNSQPHETGFFCDGGDYDGFYGRFFLNWYSKVLVDHGNGVLSLAKLAFEGSCIAAKLANIYWWYKTASHAAELTAGYYNPCNRDGYVAIMEMLKSNGVSLNIACADLNTLNQLEVFPKAFADPEGLVWQVLNAGWDLGLPVAGENALPCLNRVTYNKALDSAKPMNDPDGRHFSSFTYLRLSPLLMEQQNLREFERFVKRMHGEAVLDLQV* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3340 703 MobiDBLite consensus disorder prediction 145 181 - -
Amo14g3340 703 MobiDBLite consensus disorder prediction 206 230 - -
Amo14g3340 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 300 314 IPR001554 GO:0000272|GO:0016161
Amo14g3340 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 321 339 IPR001554 GO:0000272|GO:0016161
Amo14g3340 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 343 364 IPR001554 GO:0000272|GO:0016161
Amo14g3340 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 436 458 IPR001554 GO:0000272|GO:0016161
Amo14g3340 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 509 528 IPR001554 GO:0000272|GO:0016161
Amo14g3340 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 543 559 IPR001554 GO:0000272|GO:0016161
Amo14g3340 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 560 571 IPR001554 GO:0000272|GO:0016161
Amo14g3340 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 578 601 IPR001554 GO:0000272|GO:0016161
Amo14g3340 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 618 640 IPR001554 GO:0000272|GO:0016161
Amo14g3340 703 MobiDBLite consensus disorder prediction 11 36 - -
Amo14g3340 703 Gene3D Glycosidases 256 702 - -
Amo14g3340 703 PANTHER BETA-AMYLASE 77 703 - -
Amo14g3340 703 PANTHER - 77 703 IPR001554 GO:0000272|GO:0016161
Amo14g3340 703 SUPERFAMILY (Trans)glycosidases 262 699 IPR017853 -
Amo14g3340 703 MobiDBLite consensus disorder prediction 58 76 - -
Amo14g3340 703 Pfam BES1/BZR1 plant transcription factor, N-terminal 81 217 IPR008540 -
Amo14g3340 703 Pfam Glycosyl hydrolase family 14 269 689 IPR001554 GO:0000272|GO:0016161
Amo14g3340 703 MobiDBLite consensus disorder prediction 147 181 - -
Amo14g3340 703 MobiDBLite consensus disorder prediction 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3340 Amo-Chr14 135531856 135536937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3340 1 700 Glycoside Hydrolase AT2G45880 65.057 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Amo14g3340 Glyco_hydro_14 6.4e-102 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3340 K01177 - gmx:100805560 1155.58