Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3335 ATGGCTCTAGTAATTTTTGCTAGAACTTATTTCATTCTAGGGGTAGTTACTATAATTATGTTACCATTATTAGGCAACACTTTTTCAATATTTCCACAGAAAACACATGTGAGGATCGAAAATGCTTTGGAAGGCAATAAGGATCTAATGGTTCATTGCAAATCAAGAGATAATGATATTGGAGAGCAATATCTCAAGCCTCATCAGTGTTTTGAATTTCACTTTAAAACTAATATTTGGGGCTCCACACTTTTCTTTTGTGGCTTTAATTGGCAAGGTGGTCGCCATTGGTATGATATATACATACATGAAAGGGATTTTACAGTGTGTAGCAAACTTTGTGCTTGGCAAGTAAAACAAAAAGGACCATGTTTATATGATCATAAAACTAATTCCTACACTCACTGTCGTGTGTGGAATGATCAAATATTTCATCAGGAAGGGAAGCATCGAAGCAAATACGAGAGGAGATAA 474 0.3502 MALVIFARTYFILGVVTIIMLPLLGNTFSIFPQKTHVRIENALEGNKDLMVHCKSRDNDIGEQYLKPHQCFEFHFKTNIWGSTLFFCGFNWQGGRHWYDIYIHERDFTVCSKLCAWQVKQKGPCLYDHKTNSYTHCRVWNDQIFHQEGKHRSKYERR* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3335 157 Pfam Plant self-incompatibility protein S1 36 139 IPR010264 -
Amo14g3335 157 PANTHER - 15 139 IPR010264 -
Amo14g3335 157 PANTHER S-PROTEIN HOMOLOG 2 15 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3335 Amo-Chr14 135419467 135420126 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3335 34 142 Carbohydrate Esterase AT3G16970 36.607 3.74e-24 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3335 - - adu:107485685 143.665