Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3321 ATGGATCATGGGGACCAAATGGCATCTTACTATATGCAGCAGAGAGGAATACCTGGTTCTGGAGCACAGCCKGAGTTTTCGGCCGGAATCCGGTCGCTGTCTAGCCCCAACCTACCATTTCAATCCGGCATTGGCAGTGGTGGATCAATTGGATCCACTATACAGCTAGAATCTTCYGGGATTTCGACCCARGGTGTCAATGTTGGTGCTCCTCCGGGGGTACCGCCTGGGGAACCTGTCAAAAGGAAGAGAGGAAGGCCAAGGAAATATGGGACTGATGGAACTGTGTTGGCTCTTACACCAACTTCGTCGAGTCATCCCGGAACCATGACGACACCAGGCCAGAAACGGGGCCGAGGACGGCCCCCTGGGACTGGGAAGAAACAGCAATTGGCATCACTTGGTGAGATGATTTCTGGTTCGGCTGGGATGGGATTCACTCCTCATGTCATCAACATAGCAAGTGGAGAAGACATTGCAACGAAAATTATGGCATTTTCTCAGCAGGGGTCTAGATTTGTGTTTATTTTGTCTGCCACCGGTGCTGTTTCCACTGTCACACTTCGCCAACCTTCAACTTCAGGTGGCTCAGTCACATATGAGGGGCGTTTRGAGATATTGTGCCTGTCAGGCTCTTACTTGCTTACTGATAATGCTGGATCACGCAATCGAACTGGCGGACTAACTGTTTCCCTTGCTAGTCCTGACGGACGAGTCATTGGRGGAGGAGTTGGGGGAGTGCTCATTGCATCAAGTCKTGTTCAGGTGATAGTTGGAAGCTTTATATGGGGTGGATCAAGAACAAAGAAGAAAAAGGAAAGCTCAGAAGGGGTAGAAGCTGCTATGGAGTCGGACCACCAACCGATTCACAATCCGGTTGCACTAAACAGCATTTCGCCGAATCAAAATCTTACTCAAACCCCATCTTTGAGTCCGTGGCCGGCGTCGCGTCCTTTGGACATGCGTAATTCCCATGTTGACATTGATTTAATGCGTGGGTGA 1002 0.499 MDHGDQMASYYMQQRGIPGSGAQPEFSAGIRSLSSPNLPFQSGIGSGGSIGSTIQLESSGISTQGVNVGAPPGVPPGEPVKRKRGRPRKYGTDGTVLALTPTSSSHPGTMTTPGQKRGRGRPPGTGKKQQLASLGEMISGSAGMGFTPHVINIASGEDIATKIMAFSQQGSRFVFILSATGAVSTVTLRQPSTSGGSVTYEGRLEILCLSGSYLLTDNAGSRNRTGGLTVSLASPDGRVIGGGVGGVLIASSXVQVIVGSFIWGGSRTKKKKESSEGVEAAMESDHQPIHNPVALNSISPNQNLTQTPSLSPWPASRPLDMRNSHVDIDLMRG* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3321 333 SMART AT_hook_2 81 93 IPR017956 GO:0003677
Amo14g3321 333 SMART AT_hook_2 116 128 IPR017956 GO:0003677
Amo14g3321 333 MobiDBLite consensus disorder prediction 96 112 - -
Amo14g3321 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 26 303 - -
Amo14g3321 333 Pfam Plants and Prokaryotes Conserved (PCC) domain 148 261 IPR005175 -
Amo14g3321 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 26 303 IPR039605 GO:0003680
Amo14g3321 333 MobiDBLite consensus disorder prediction 273 318 - -
Amo14g3321 333 MobiDBLite consensus disorder prediction 62 129 - -
Amo14g3321 333 CDD DUF296 147 261 IPR005175 -
Amo14g3321 333 SUPERFAMILY AF0104/ALDC/Ptd012-like 146 264 - -
Amo14g3321 333 Gene3D - 148 285 - -
Amo14g3321 333 MobiDBLite consensus disorder prediction 290 313 - -
Amo14g3321 333 ProSiteProfiles PPC domain profile profile. 142 284 IPR005175 -
Amo14g3321 333 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3321 Amo-Chr14 134943165 134947894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3321 80 333 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 55.133 2.56e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3321 - - gmx:100814615 484.952