Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3314 ATGGCATTTGCACCTGTTATTGCTGGAAAGACTTGTAGTATAGCTGACCAAAGTGGTTCTGGAAAGACTTTAGCATATCTTGCACCAATAATTCAGCGTCTTAGGCAAGAAGAACTAGAAGGACATAGTAAATCCACTCCTCAAGCTCCTAGAGTTGTCATACTAGCACCAACAGCTGAATTAGATTCCCAGGTCTTAGATAATTGTCGATCACTGTCTAGATCTGGGGTTCCATTTAAATCTATGGTTGTCACAGGTGGCTTTCGACAAAGAACTCAACTGGAAACTTTACAACAGGGTGTTGATGTATTAATAGCTACACCTGGCCGTTTTTTGTTTCTTATGAAGGAAGGCTTCTTGTAG 363 0.4077 MAFAPVIAGKTCSIADQSGSGKTLAYLAPIIQRLRQEELEGHSKSTPQAPRVVILAPTAELDSQVLDNCRSLSRSGVPFKSMVVTGGFRQRTQLETLQQGVDVLIATPGRFLFLMKEGFL* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3314 120 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 3 120 IPR014001 -
Amo14g3314 120 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 1 120 - -
Amo14g3314 120 Gene3D - 1 120 IPR027417 -
Amo14g3314 120 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 1 120 - -
Amo14g3314 120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 119 IPR027417 -
Amo14g3314 120 Pfam DEAD/DEAH box helicase 5 117 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3314 Amo-Chr14 134782113 134789190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3314 17 116 Eukaryotic Initiation Factors Gene Family AT1G72730 31.000 9.86e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3314 K13179 - gmx:100784377 201.445