Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3277 ATGGCTGAAGCACTTGTTGTTGGAGCTTTAGTTTCTGGCTCCATCAGCCTTGTTCTTAACAGGCTCATTTCACCTGAGTTTGTCAACTCGTTGGTGAGCAAGAAGCTGGACCGAAAGTTGGTTGAGAGGCTCAAGACTGCTCTCTTGGCTGCAGAAGCTCTAGCCGCTGACGCCGAGCAGAGGCAGTTTGGAAACGATCGTGTGAGGAAATGGCTTGAAAGTCTCAGGGATGCTCTCTACACTGCTGATGACTTGCTGGAACGTGTCTTAATCAGAGCTGAAATTCGCAACAAGGCACGCATTCGCCTTCCTCGCTTCTTCCTTAATTTGTATGATTGGAAGATGGAGACTAAGATAGAGGATGTGGTAAAAAGAATAGAAGATCTTGAGAAACRYAAAGATACCCTTGGTCTCAAAGAGATTCCAACGGGAAGCTCCTCATGGAGACCTCCATCCACTTCTCTTGTWAAGGGGAASGTGTTYGGCAGGGATGCTGACCAGCAGGCACTAATCARGATGCTCAATGACAAAAATGATCRCAACTTGTCCGTCATCTCTATTGTTGGTATGGGCGGTGTTGGAAAAACAACTTTAGCACAATGGCTCTACAACAACAAGGATTTGATGGACGGGGTTGATMTGAAAGCATGGATTTGTGTTTCKGAAAATTTTGATGTTGTTGAGACTACAAAGAATGTTATAAAGGGGATCTCKTCGGGTGTTTGTAGTCTTGACAGCTTTGATTTACTTCAACAACATTTGAAGGACAAACTGTCAAAAAAGAAGTTCTTCATTGTTTTGGACGATGTTTGGAGTGAAGATGCTGACAAGTGGCATAGTTTTATCGCCCCTTTTCAACATGGGAGAAARGGAAGCACTATTCTCCTAACTACCCGCATGGTAAATGYTGGTCGAATAGTCCAACACTATAACTCTTACACCCTCAATCAACTGTCAGATGATGATTGTTGGTCTATTTTTGCGGAYAATGCATCCTTTCCTGAATCAAATGGGAGCTCAGAACTGGAAGGAATAGGTAGAAAGATTGTTGAAAGGTGTGATGGCTTGCCGTTTGCTGCAGAAACACTTGGACGCTTGTTGCGCTCAGAGCGTCGTGTTGAAGAATGGAATAAAATACTTAAGATCGTTCCTGCGTTGTTAATAAGTTACTATCATCTGCCTGCTCATTCAAAACATTGCTTTGTTTATTGTTCATTGTATCCCAAAGATTATAAACTTGATAAAGATGAATTAATCTTACTGTGGATGGCTGAAGATCTTTTACAACCACCAAGCAGGGGACAGACTCTAGAAGAAGTTGGTTGTGAGTGTTTTGAGGGCTTGGTTTCAAGACTATTCTTCAAGCAGGTCGAGAACGATGACGAGAAGTATTTTCTGATGCATGACTTGGCAACTTTTCTTGCTGGAGATCTTTATTGTAAATTTGGTGAAAAAGAAGCGATGAGTATTCTAACTCGTCATTTGTCATACAATCATTCAATCCCTGAGAAAATATGCTCCTCTAGTAAAATAGAATCTTTGAGGACAGTATTGTATATCAATGATTGGTCTTATTACGAGAAAGCACCCGCAACGGGTACTCCCCTGAAAGAAATGCCCAAAGGAATCAGCAAATTAAAACAGTTGCACATTTTAAGCAAGTTTGTAGTGGGAAAGAAAGAAGACAATGGAATCCAAGAGCTAGGAGGGCTTTTAAATCTTCATGGATCACTTGAGATTGAGAGATTGGAGAATGTGGTTGATGCCAATGAAGCAAGGAGTGCAAGGATAATAGATAAGAAGCACATTGAAGAGTTATTGTTGAAATGGTCTCTGTCTTCAGGTGATGATATGGTTTCAAACACTCATACTGATGAACAAGATATACTCCACGGCTTGCAACCACACACTGGCTTGAAAGAGTTAACTGTTGAAGGATTCAAAGTGTACCAAAACATGACAAAAGAAGATGCTGAAAGATGGTATAAAAAGATGAGTCTTGATGGGGATAGGTTATCAATTAGGGGATTTGAATCTGTGGCAGAGTGTGGATTTAAGGCAAGGATCATCCACCATCTAACTTGCCTCCAAGAAATACAAATCTCAGACTGTTCATCTGTTGTATCCTTGGGGGGCAATTGTTTACCCAAATCTTTGCAAAAGCTCAAAATCTTTAATTGCCACCAAATTGAATTACTCCAGCAACAACACAAGTATGATTTGGTAGAGCTACGAATAGAACACAGCTGTGATTCACTGACCTCATTGTCGTTGGATGCCTTTCCCAATCTCGAGAATCTGCAGATAGTGAGGTGTTCAAATCTGGAATCAGTTTCAATGTCAGAGCCACCACAGGATGCTCTTCAACATCTCACCATCTCTAACTGCCCCCAGTTTGTGTCATTTCCCCAAGAAGGACTGGCTACACCCAACTTGACTCATCTCCATGTTAGCAGGTGCTGGAAGTTGGAGGCATTGCCACGTGTCATGAATACTCTTCTCCCAAATTTAGAGTCTCTCGACATAGCAGGTTGCCCAAACATTTGCAGGTGGCCAGAGGGTGGTTTGCCGGCTAACCTGAAAGAGCTTAGGATAGGAGAATGCGAGGAACAAGTGAGGGGTCTATCATGGTTGGGCAACTTGGACAACCTCACTCATCTCACCATCTCAGGTCATGGCAGTGAGAGCATAATAGAGTCATACCCAGAGGTGGGTTGGCTGCATCGCCTTCCCTCCCTTACTACTCTACATATCCAAGACTTTCATAATCTGGAGACATTGGAGTGCAACGAGCTTCTCCGCCTCACCTCCCTCCAAGAATTACACATTTCATGGTGTCATAAGCTGGAGAATATTGCAGGAGAAAAGCTGCCTCCCTCTCTCTTACTACTTCAAATTGACAACTGTCATTTGCTGGGCAAACACTGCAAGAACAAGCATAAACAAATTTGGTCCAAAATTTCCCACATTCCCACCATTCAAGTCGATGGCAAGCAAATTTTCTGA 3006 0.4238 MAEALVVGALVSGSISLVLNRLISPEFVNSLVSKKLDRKLVERLKTALLAAEALAADAEQRQFGNDRVRKWLESLRDALYTADDLLERVLIRAEIRNKARIRLPRFFLNLYDWKMETKIEDVVKRIEDLEKXKDTLGLKEIPTGSSSWRPPSTSLVKGXVFGRDADQQALIXMLNDKNDXNLSVISIVGMGGVGKTTLAQWLYNNKDLMDGVDXKAWICVSENFDVVETTKNVIKGISSGVCSLDSFDLLQQHLKDKLSKKKFFIVLDDVWSEDADKWHSFIAPFQHGRKGSTILLTTRMVNXGRIVQHYNSYTLNQLSDDDCWSIFADNASFPESNGSSELEGIGRKIVERCDGLPFAAETLGRLLRSERRVEEWNKILKIVPALLISYYHLPAHSKHCFVYCSLYPKDYKLDKDELILLWMAEDLLQPPSRGQTLEEVGCECFEGLVSRLFFKQVENDDEKYFLMHDLATFLAGDLYCKFGEKEAMSILTRHLSYNHSIPEKICSSSKIESLRTVLYINDWSYYEKAPATGTPLKEMPKGISKLKQLHILSKFVVGKKEDNGIQELGGLLNLHGSLEIERLENVVDANEARSARIIDKKHIEELLLKWSLSSGDDMVSNTHTDEQDILHGLQPHTGLKELTVEGFKVYQNMTKEDAERWYKKMSLDGDRLSIRGFESVAECGFKARIIHHLTCLQEIQISDCSSVVSLGGNCLPKSLQKLKIFNCHQIELLQQQHKYDLVELRIEHSCDSLTSLSLDAFPNLENLQIVRCSNLESVSMSEPPQDALQHLTISNCPQFVSFPQEGLATPNLTHLHVSRCWKLEALPRVMNTLLPNLESLDIAGCPNICRWPEGGLPANLKELRIGECEEQVRGLSWLGNLDNLTHLTISGHGSESIIESYPEVGWLHRLPSLTTLHIQDFHNLETLECNELLRLTSLQELHISWCHKLENIAGEKLPPSLLLLQIDNCHLLGKHCKNKHKQIWSKISHIPTIQVDGKQIF* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3277 1001 Gene3D - 153 311 IPR027417 -
Amo14g3277 1001 Gene3D - 16 131 - -
Amo14g3277 1001 Coils Coil 41 61 - -
Amo14g3277 1001 Pfam Rx N-terminal domain 35 97 IPR041118 -
Amo14g3277 1001 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 404 IPR027417 -
Amo14g3277 1001 SUPERFAMILY RNI-like 497 731 - -
Amo14g3277 1001 Gene3D Ribonuclease Inhibitor 738 833 IPR032675 -
Amo14g3277 1001 Gene3D Ribonuclease Inhibitor 834 990 IPR032675 -
Amo14g3277 1001 Gene3D - 389 475 IPR036388 -
Amo14g3277 1001 SUPERFAMILY L domain-like 684 971 - -
Amo14g3277 1001 Gene3D - 317 388 IPR042197 -
Amo14g3277 1001 Coils Coil 133 139 - -
Amo14g3277 1001 Coils Coil 119 131 - -
Amo14g3277 1001 PANTHER OS05G0414200 PROTEIN 32 846 - -
Amo14g3277 1001 PANTHER DISEASE RESISTANCE PROTEIN RP 32 846 IPR044974 GO:0006952
Amo14g3277 1001 Gene3D Ribonuclease Inhibitor 489 737 IPR032675 -
Amo14g3277 1001 PRINTS Disease resistance protein signature 257 271 - -
Amo14g3277 1001 PRINTS Disease resistance protein signature 832 848 - -
Amo14g3277 1001 PRINTS Disease resistance protein signature 184 199 - -
Amo14g3277 1001 PRINTS Disease resistance protein signature 353 367 - -
Amo14g3277 1001 Pfam NB-ARC domain 166 381 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3277 Amo-Chr14 133938833 133942230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3277 171 414 WRKY Transcription Factor Family AT5G45050 23.485 3.60e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3277 - - aip:107624780 934.095