Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3275 ATGGCTGAAGCACTTCTTGTTGGAGCTTTAGTTTCTGGCTTCGCCAATTTTGTCAACTTGGTGGTGGGCAGGAAGCTGGACCGGAAGTTGGTTGAGAGGCTCAAGACTGCTCTCTTGGCTGCTGAAGCTCTGGTTGCTGACGCTGAGCAGAAGCAGTTTGGAAACGATCGTGTAAGGAAATGGTTTGATAGTCTCAGGGATGCTCTCTACACTGCTGATGACTTGCTGGACTGTGTCTTCATCAAAACTGAAATTCGCAACAAGGTACGCACTCATCTTCCTAGCTTCCTTAACTTGTCTGATAGGAAGATGGTGACTAAGATAGAAGAGGTGGTTAAAACAATAGAAGATCTTGAGAAACTCAAAGATACCCTTGGTCTTGAAAAGATTCCAACGAGTAGCTCCTCATGGAGACCTCCATCCACTTCTCTTGTAAAGGGGAATGTGTACGGCAGGGATGGTGATCAACAGGCACTAATCAAGATGCTCAATGACAACAATGATCATAACTTGTCCGTCAGCTCTATTGTTGGTATGGGTGGGGTTGGTAAAACTACTTTAGCACAATGGCTGTTCAACAATAAGGATTTGATGGACGGGGTTGATCTGAAAGCATGGATTTGTGTTTCTGAAAATTTTGATGTTGTTGAGACTACTAAGAATGTTATAAAGGGGATCTCTTCAGGTGTTTGTAGTCTTGACAGCTTTGATTTACTTCAACAACATTTGAAGGAAAAACTGTCAGAAAAGAAGTTCTTCATTGTTTTGGACGATGTTTGGAGTGAAGATGTTGACAAGTGGAATAGTTTTGTCACCCCTTTTCAACATGGGAGAAAAGGAAGCACTATTCTTCTAACTACCTGCAAGGAAAATGTTGGTCGAATAGTCCAACACTATAACTCTTACACTCTCAAGGAACTGTCAGACGATTATTGTTGGTCTATTTTTGCGGACAATGCATCCTTTCCTGAATCAAATGGGAGCTCGGAACTGGAAGAAATAGGTAGAAAGATTGTCAAGAGGTGTGATGGTTTGCCATTAGCTGCAGAAACACTTGGATGCTTGCTGCGCTCAGAGCGTCGTGTTGAAGAATGGAATAAAATACTATCAAATGACATTTGGGAATTTCCTATGCCAAATAGTAAAATTTTTCCTGCATTGTTAATAAGTTACTATCATCTTCCTGAACATTCAAAACGCTGCTTTGTTTATTGTTTGTTGTATCCCAAAGATTATCAATTTGATAAAGATGAATTAATCTTGCTATGGATGGCTGAAAATCTTTAA 1287 0.4056 MAEALLVGALVSGFANFVNLVVGRKLDRKLVERLKTALLAAEALVADAEQKQFGNDRVRKWFDSLRDALYTADDLLDCVFIKTEIRNKVRTHLPSFLNLSDRKMVTKIEEVVKTIEDLEKLKDTLGLEKIPTSSSSWRPPSTSLVKGNVYGRDGDQQALIKMLNDNNDHNLSVSSIVGMGGVGKTTLAQWLFNNKDLMDGVDLKAWICVSENFDVVETTKNVIKGISSGVCSLDSFDLLQQHLKEKLSEKKFFIVLDDVWSEDVDKWNSFVTPFQHGRKGSTILLTTCKENVGRIVQHYNSYTLKELSDDYCWSIFADNASFPESNGSSELEEIGRKIVKRCDGLPLAAETLGCLLRSERRVEEWNKILSNDIWEFPMPNSKIFPALLISYYHLPEHSKRCFVYCLLYPKDYQFDKDELILLWMAENL* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3275 428 Gene3D - 141 302 IPR027417 -
Amo14g3275 428 Coils Coil 31 51 - -
Amo14g3275 428 Gene3D - 390 428 IPR036388 -
Amo14g3275 428 Coils Coil 108 128 - -
Amo14g3275 428 Pfam Rx N-terminal domain 28 80 IPR041118 -
Amo14g3275 428 Gene3D - 4 121 - -
Amo14g3275 428 PANTHER DISEASE RESISTANCE PROTEIN RP 15 428 IPR044974 GO:0006952
Amo14g3275 428 PANTHER OS05G0414200 PROTEIN 15 428 - -
Amo14g3275 428 Gene3D - 306 389 IPR042197 -
Amo14g3275 428 Pfam NB-ARC domain 156 370 IPR002182 GO:0043531
Amo14g3275 428 PRINTS Disease resistance protein signature 246 260 - -
Amo14g3275 428 PRINTS Disease resistance protein signature 173 188 - -
Amo14g3275 428 PRINTS Disease resistance protein signature 342 356 - -
Amo14g3275 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 405 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3275 Amo-Chr14 133914559 133915875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3275 176 364 WRKY Transcription Factor Family AT5G45050 27.500 6.59e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3275 - - aip:107622623 712.22