Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3274 ATGATGCAGATCCTATGCGGTGTTGACTCGTGTCACCGGAACATGATCGTGCATCGGGATTTGAAGCCCGGTAATCTGTTGATCGGAGATGATGGAATTCTCAAGTTGGCAGATTTTGGACAGGCAAGGATACTTGGGGAGCCAGGATTTGATACTTCTGAGGAGAACCCACAAGCTTATGAACATGATGGTTCTTCACTCCAAGCAGGGTCTGGAAATCAAGAGCAGGGAACTGTCCTTCGCGAAGAATATTTTAGAGTCTTGGATGAACTGAAAACAAAGAGATCTGCAGATGACATTGATAAGGATACAAACATTCCTGATGGAAATACCTCCTGTCTTGCAACGTGCACAACAAGTGATATAGATGATGACCCTTTGAAATCCAGCTTTACTTATGAAGCAAGGGAGGACGAAGGAGAAGAATCGGGTTGTCTCACGTCGTGCGTTGGAACTCGTTGGTTTAGGGCTCCTGAGCTCCTTTATGGATCCACAAACTATGGTTTAGAAATTGATCTATGGTCTTTGGGATGTATATTTGCAGAGCTCTTTACACTGGAGCCCTTATTTCCTGGAACAGCCGATATTGATCAGCTTAGTAGGATTATTAATGTTTTGGGCAACCTCGACGAGAAAGCATGGCCAGGTTGTTCCAAACTTCCCGATTATGGAATAATCTCATTTAGTAAGGTGGAAAACCCTCCTGGGCTTGAAGCTTGCCTGCCCAATCGCTCCCYCGACGAAGTGKCTCTAGTAAAAAAGCTGGTTTGTTAYGATCCGGCCAAGAGAGCTACAGCAACGGAGCTACTCCATGACAAGTACTTTAATGAAGAACCTCTTCCTGTTCCGGTTTCAGAGTTGCATGTTCCTTTGAACAGAAAGGGAGAAGATGAAAACTCTCCGTGGCATGATTACAATTACATGGGTTCTGATTCTGACCTGGAGGACTTTGGCCCTGTGAATATCACAAAAACTGGTACTGGTTTCTCCATCCAGTTTCCATGA 1005 0.4468 MMQILCGVDSCHRNMIVHRDLKPGNLLIGDDGILKLADFGQARILGEPGFDTSEENPQAYEHDGSSLQAGSGNQEQGTVLREEYFRVLDELKTKRSADDIDKDTNIPDGNTSCLATCTTSDIDDDPLKSSFTYEAREDEGEESGCLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQLSRIINVLGNLDEKAWPGCSKLPDYGIISFSKVENPPGLEACLPNRSXDEVXLVKKLVCYDPAKRATATELLHDKYFNEEPLPVPVSELHVPLNRKGEDENSPWHDYNYMGSDSDLEDFGPVNITKTGTGFSIQFP* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3274 334 SUPERFAMILY Protein kinase-like (PK-like) 1 281 IPR011009 -
Amo14g3274 334 Gene3D Transferase(Phosphotransferase) domain 1 1 281 - -
Amo14g3274 334 ProSiteProfiles Protein kinase domain profile. 1 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3274 334 SMART serkin_6 1 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3274 334 PANTHER CYCLIN-DEPENDENT KINASE 10 1 295 - -
Amo14g3274 334 PANTHER CELL DIVISION PROTEIN KINASE 1 295 - -
Amo14g3274 334 Pfam Protein kinase domain 143 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3274 334 Pfam Protein kinase domain 1 49 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3274 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 16 28 IPR008271 GO:0004672|GO:0006468
Amo14g3274 334 MobiDBLite consensus disorder prediction 46 74 - -
Amo14g3274 334 MobiDBLite consensus disorder prediction 59 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3274 Amo-Chr14 133911227 133913761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3274 1 334 Core Cell Cycle Gene Families AT4G28980 60.623 2.58e-153 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Amo14g3274 Pkinase 6.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3274 - - aip:107626750 673.315