Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3266 ATGGCTGGAAAGACCACAGTAAATGCATTCAGACTCAGGGTTTTCATAGGAACAATTATCTTTGTTGTTCCTATCATTTGTCAATGGCGAAGAAGACACATGTCATCATATGAGAATATCGAGATATTCGTACAAAATAATAATAATCTGGAGCCAATAAAATATTCATATAGAGAAATAAAAATGATGACAAAAGATTTTAAAGAAAAATTAGCAGTAAAGATATTAGATACATCTAAATCTAAAGAACAGGATTTCTTTAGTGAAATAATGACCATCGGAAGAATTCACCATATAAATGTGGTGAGATTGGTTGCATTTTGTGTCGAAGGATCAAAACGTGCTCTAATGTCATTGGAAATTGCAAGAGGTATTTCTTACCTTCATGAAGGGTGTGACATGCAAATTTTGCACTTCGACATTAAACCACATAATATTCTTCTAGATGAAAATTTTATCCAAAAAGTTTCTGATTTTGGATTAGCAAAATTATATCCTAGAGATAATAACATTGTTATTTTGACGGATAGAAGAGGGACAATTGGATACACTGCACCCGAATTGTTTTACAACAATATCGGAGGAGTCTCGTACAAGGCTGATATATATAGTTTTGGAATGTTGTTGATGGAAATGGCAAACCGAAGGAAGAATTTGAATCTGCACGCAGAGAACTCAAGCAGCACATTCTTTTCTACCTAG 702 0.3348 MAGKTTVNAFRLRVFIGTIIFVVPIICQWRRRHMSSYENIEIFVQNNNNLEPIKYSYREIKMMTKDFKEKLAVKILDTSKSKEQDFFSEIMTIGRIHHINVVRLVAFCVEGSKRALMSLEIARGISYLHEGCDMQILHFDIKPHNILLDENFIQKVSDFGLAKLYPRDNNIVILTDRRGTIGYTAPELFYNNIGGVSYKADIYSFGMLLMEMANRRKNLNLHAENSSSTFFST* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3266 233 Gene3D Phosphorylase Kinase; domain 1 57 115 - -
Amo14g3266 233 PANTHER RUST RESISTANCE KINASE LR10-RELATED 117 232 IPR045874 GO:0004672
Amo14g3266 233 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 13 117 - -
Amo14g3266 233 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 117 232 - -
Amo14g3266 233 PANTHER RUST RESISTANCE KINASE LR10-RELATED 13 117 IPR045874 GO:0004672
Amo14g3266 233 Gene3D Transferase(Phosphotransferase) domain 1 116 229 - -
Amo14g3266 233 SUPERFAMILY Protein kinase-like (PK-like) 47 219 IPR011009 -
Amo14g3266 233 SMART serkin_6 10 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3266 233 ProSiteProfiles Protein kinase domain profile. 10 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3266 233 Pfam Protein kinase domain 117 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3266 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Amo14g3266 233 Pfam Protein tyrosine and serine/threonine kinase 63 113 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3266 Amo-Chr14 133720646 133721494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3266 15 231 Receptor kinase-like Gene Family AT5G38260 37.638 2.74e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo14g3266 Pkinase 1.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3266 - - mnt:21384907 285.419