Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3232 ATGCCAAAATTGGTTGAAGTGAATCTTGAGGGGAATTCCATCGAGGGTTCTATCCCAGACTTATCCAATTCCACCAGCTTGCAATATCTATTGCTTGCAAACAATCGGTTAACGGGTGTAGTTCCACCTTTTCTGGGATTGCTCAATAATATCTCTCAAGTTTCATTGGAAAACAACTGGTTGCAGGGTCCTCTTCCTGCATTTAATAAGAGTCGGGCTCCAAAGCTAAATTTCACTTCTAATGGATTCTGTTTAGACCATCCTGGACCTTGTGATCACAGAGTCATCACTCTGCTTCAAGTTGCTCAGACACTTTATTATCCATTTCTGCTGGCACAATCGTGGCGAGGAAACAATCCGTGTCAAGATTGGAATTTTATCACCTGTGATGATAAGGGCAACATCAGAACCGTAAATTTGACCAACTTGAATTTGACGGGAACAATATCTCTCTCATTCAAGAATTTAACGGTTCTGGAAGGATTGTATCTTGGTGGAAATAGACTGAACGGTTCCATACTAGATATCTTGACAAGTCTACGACAACTCAAGATTCTGGATGTGTCTAACAATAATTTATCGGGAAGTCTTCCACCGTTCTCAAAAAAAAAAACCATTGTCATTACCACAGGCAATGCTTTTCTCCAGCAGTCTCACTCGCCGAAAACCTCGCTCTCTTCTACTTTCATTATAGGTATATCAGCTGGTGTTGGCGTTATTGTAATGATCTTTGTTGCAATTTCTTATTATTGCAAGAGGCATTTCAGTAGGATAATGCTGAACAAAGAAACATCTCTTGTTCGACAATTTGGGGAGCAAATAAATAATGCAACACTAGTGAGATATACTTATGCAGAAGTAGAACAGATGACAAACTCATTTCAAGAAGAGTTAGGAAAAGGAGGATTTGGTATTGTATACAAAGGAAGTTTAAATGATGGTTGTCAACTGGCAGTGAAGATACTTAAGGAGATGAAAGGAAGTGCAGAAGAATTTGTAAACGAGGTTGTTACTATCAGTAGAACATCTCATGTGAACATTGTTTCACTTTTGGAATTTTGCTATGAAATGAATAAACAGGCTCTTATTTATGAATTCATGTCTAAGGGCTCTTTGGATAAATATAAATGTAAAGAGGGATCTTCCGAGTTAGATTGGAAAACACTACTTCAGATTGTAACTGGCGTTGCTCAAGGGTTAGACTACTTACATCGAGGGTGCAATACAAGAATTTTGCATTTTGATATCAAACCCCAAAATATGCTTCTTGATGAAAAATTTTGTCCAAAAATTGCTGATTTTGGACTAGCTAGAATATGCAAAAAGGATGAAAGTGTTGTGTCTATATTAGACAGAAGAGGGATTCCGGGTTATATTTCACCAGAAATGTTTAGTCGAAGGAATGGTAGAGTTTCTCACAAGTCAGATGTATATAGTTATGGAATGCTAATTCTTGAAATGATTGGAGGAAACGATAATTATGATATTGGAGAATCTCATAGTACTGAATACTTTTCTGATTGGATTTTGAAGGATATCAAAGAAGATAAAATTCGTCTATTGAGATTTGCTTCTGGAAAAGATGATGAAGATATAATAAAAAAGATTTTATTTGTCGGTTTATGGTGCATCCAAATGAATCCATCAGATAGACCAAAAATGTGTAAAGTGGTGGAAATGTTACAAGGAAAACTTGAATCAATATCACTAGAGTCCATCATATCTTCTCCGACAGTACCTCTCTTACAGCATTCAGATGCATCTCATAGCTGA 1773 0.3683 MPKLVEVNLEGNSIEGSIPDLSNSTSLQYLLLANNRLTGVVPPFLGLLNNISQVSLENNWLQGPLPAFNKSRAPKLNFTSNGFCLDHPGPCDHRVITLLQVAQTLYYPFLLAQSWRGNNPCQDWNFITCDDKGNIRTVNLTNLNLTGTISLSFKNLTVLEGLYLGGNRLNGSILDILTSLRQLKILDVSNNNLSGSLPPFSKKKTIVITTGNAFLQQSHSPKTSLSSTFIIGISAGVGVIVMIFVAISYYCKRHFSRIMLNKETSLVRQFGEQINNATLVRYTYAEVEQMTNSFQEELGKGGFGIVYKGSLNDGCQLAVKILKEMKGSAEEFVNEVVTISRTSHVNIVSLLEFCYEMNKQALIYEFMSKGSLDKYKCKEGSSELDWKTLLQIVTGVAQGLDYLHRGCNTRILHFDIKPQNMLLDEKFCPKIADFGLARICKKDESVVSILDRRGIPGYISPEMFSRRNGRVSHKSDVYSYGMLILEMIGGNDNYDIGESHSTEYFSDWILKDIKEDKIRLLRFASGKDDEDIIKKILFVGLWCIQMNPSDRPKMCKVVEMLQGKLESISLESIISSPTVPLLQHSDASHS* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3232 590 ProSiteProfiles Leucine-rich repeat profile. 182 204 IPR001611 GO:0005515
Amo14g3232 590 Gene3D Ribonuclease Inhibitor 1 91 IPR032675 -
Amo14g3232 590 Pfam Protein tyrosine and serine/threonine kinase 294 561 IPR001245 GO:0004672|GO:0006468
Amo14g3232 590 Gene3D Phosphorylase Kinase; domain 1 256 366 - -
Amo14g3232 590 SUPERFAMILY Protein kinase-like (PK-like) 274 561 IPR011009 -
Amo14g3232 590 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Amo14g3232 590 PANTHER TYROSINE KINASE FAMILY PROTEIN 36 589 - -
Amo14g3232 590 Gene3D Ribonuclease Inhibitor 93 215 IPR032675 -
Amo14g3232 590 PANTHER RUST RESISTANCE KINASE LR10-RELATED 36 589 IPR045874 GO:0004672
Amo14g3232 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Amo14g3232 590 SUPERFAMILY L domain-like 2 202 - -
Amo14g3232 590 Gene3D Transferase(Phosphotransferase) domain 1 367 573 - -
Amo14g3232 590 ProSiteProfiles Protein kinase domain profile. 292 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3232 590 SMART serkin_6 292 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3232 Amo-Chr14 133430295 133432407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3232 277 590 Receptor kinase-like Gene Family AT5G38280 54.630 5.56e-115 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo14g3232 PK_Tyr_Ser-Thr 8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3232 - - ahf:112743101 1144.8