Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3185 ATGGCAACACAACATAAGGGTCATACGATAGGAATCAATCTTGGAACTACATACTCGTGTCTTGCAGTATGGGAAGAACAAAATGGTCGTGCAGAGATTATTGTGAATGATCAAGGCCAACAGAACCACACCTTATTTGGGTGTGCATCTTCTCATCTAACAGTTTTCATATTTGATCTTGGTGGTGGTACCTTTGATGTGTCTCTAGTCACAATTGAAGATGATAACATTGAAGTTAAGGCCATTTCTGGAGACACTCATCTCAGAGGGAAAGATTTCAATAACAGAATGGTGAGTCACTTGGTACAAGAGTTCAAAAGAAAGATCAGAATGGACATTACTCGGGATCCCAGAGCAATGAGGAGGTTGAGAAACGAATGTGAGAAAGCGAAAAGGATATTTTCACATGCTAATGAGATAGATGCTTTGTTTCAAGGCATTGACTTTCGTTTCTCTATAACTTGTGCAAGGTTTGAAGAACTCAACAGGGACTTGTTTGAGAAGTGCATGGAGATTGCTCAGAAGTGTCTTGATGATGCTAAGATGGAGAAAAGAGAGATACATGACGTGGTCCTTGTTGGTGGATCTTCTAGAATCCCAAAAGTTCAGAATTTATTGCAGAACTTGTTTGAAGGGAAGGATCTTTGCAAGAGTATCAACCCGGATGAAGCTGTTGCTTATGGTGCTGCAATTCAAGCTGCTTTGCTTAGTGAAAGTTATAGCATTGTGCCAAACATGGTACTAGTTGATGTCAAAGTGAGGCTTCTGAGCTTGAGAACTATCTTAAAAAGTTAA 795 0.3987 MATQHKGHTIGINLGTTYSCLAVWEEQNGRAEIIVNDQGQQNHTLFGCASSHLTVFIFDLGGGTFDVSLVTIEDDNIEVKAISGDTHLRGKDFNNRMVSHLVQEFKRKIRMDITRDPRAMRRLRNECEKAKRIFSHANEIDALFQGIDFRFSITCARFEELNRDLFEKCMEIAQKCLDDAKMEKREIHDVVLVGGSSRIPKVQNLLQNLFEGKDLCKSINPDEAVAYGAAIQAALLSESYSIVPNMVLVDVKVRLLSLRTILKS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3185 264 Gene3D Actin; Chain A, domain 4 89 168 - -
Amo14g3185 264 SUPERFAMILY Actin-like ATPase domain 8 41 IPR043129 -
Amo14g3185 264 Pfam Hsp70 protein 10 41 IPR013126 GO:0005524|GO:0140662
Amo14g3185 264 Pfam Hsp70 protein 53 258 IPR013126 GO:0005524|GO:0140662
Amo14g3185 264 ProSitePatterns Heat shock hsp70 proteins family signature 2. 57 70 IPR018181 -
Amo14g3185 264 Gene3D - 1 46 - -
Amo14g3185 264 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Amo14g3185 264 PANTHER HEAT SHOCK PROTEIN 70KDA 4 43 IPR013126 GO:0005524|GO:0140662
Amo14g3185 264 PANTHER HEAT SHOCK PROTEIN 70KDA 54 253 IPR013126 GO:0005524|GO:0140662
Amo14g3185 264 PANTHER HEAT SHOCK 70 KDA PROTEIN 54 253 - -
Amo14g3185 264 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 43 - -
Amo14g3185 264 Gene3D - 54 216 - -
Amo14g3185 264 SUPERFAMILY Actin-like ATPase domain 54 236 IPR043129 -
Amo14g3185 264 Coils Coil 120 140 - -
Amo14g3185 264 Gene3D - 217 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3185 Amo-Chr14 132071388 132073918 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3185 1 46 Calmodulin-binding Proteins AT3G12580 52.174 1.57e-08 53.1