Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3176 ATGGCTTTGAACTTCAACTTCCTCAGGCTTCTTGTCTTCATCTTTTCCCTTGTTAGCTTTATCATGAGTTTCCCAACAACTACTAAAGCAAAAGAACTTGATTACCAAGGCCCAAAGTGTTCTGAAGATAGAACCACTTTTAACAGCACCTACCAAGTAAACCTCATCACACTTTTCTCATCCCTATCTTCCAAAGCCACCATCACCATCTTCTACAACGACACCATCATAGAGAACAAAGATACTTCTAATGCAGTGTATGGACTCTTCATGTGCAGGGGTGATGTACCCTTTGATGTTTGTGGAGACTGCGTTCAAAGCGCAACCCATGTTCTCTCTACAGAGTGCACCTTATCCCTATGGGGTATGATCTGGTACGAACAATGCATGGTTCGGTATTCCAACACTCGTTTCTTTTCTGTTCCCAAAACAGAGCCCTTCACTCCCATGTCCAACAACTTCAATGTTTCCATTAATCAAGACATCTTTGTCCCTCTTCTTGTCAACACAGTGAACGAAACTGCAGATCAAGCCGCGGTTTCTCTCAACAAGTATGCCACAAAGGAACAAAAGGTAACAAAACTTGAGACGATTTTTACTCTTGCTCAATGCACCCAAGACCTCTCGGTTGGAGATTGCAGATCTTGTCTTGGATTCGCCGTTGGGCAGATCCATGAATGTTGTAAAGGAAGACGAGGAGGGAGAGTATTGCTCCCCAGCTGTAATGTTCGCTTTGAATTTTACCCTTTCTATCGTCATGGCGTCTCTAAAGCACTTGCTCCTGCTACAAAGTATCCAATCATGGAGTCGAAATATTCGCCAGATCCGGGTTATTTGTCTCACCAATGTTCAAATAATCAACCCACAAACTTACAGAAACGCCTAACGACGCTCCTCTCTGACTTGTCTTCCAAGGCAAGAAACTCGAACGACAACGAGTTCTACATGAGCAATGTTAGCAACAACTTCTTTGGCCTCTACTTGTGCCGCGCTGACCTACCCCCTTCTCTCTGCGCAGACTGCATAGTCAACGCCACAAACCGAATCGCCTCCGAGTGTCCAACGTCCATGGAGGCTGTAATCTGGTACAACCATTGCTTGCTTCGTTACTCCAACTACTCTTTCTTCAGAACAATGGGAACTAATCCGAGATTCAAGATGATGAATGTTACCGACTATGACGATTACAAAAGCTACTACAAGTACGAACTGTGGAGTGCGTTGACGAAGGTGGCGGGAGAAATCTGGGATCGGAGTGACAGATATTACACAGAGTCGTTTGTGTTGAACGATGTGCAAAGATTGTTCGTGCAGGGGCAGTGCACGAAAGATCTGGCTACTTTGGATTGTAATTACTGTATTCACGATGTGATTGAAACGGCGATTCCGTGGTGTTGTTTGGGAAGCATAGGTGGCAGAGTTTTGTATCCAAGCTGCACTTTGAGGTTTGAGTTGTTTCCATTCTATAGGAATGGTACGGACGATCAGCCTCCGTCAACTACAACTACAGTGAAAACTGGTCGATCACGAGCAGTTATCTTGATTATTGTTGTCCCCGTTGTTGCTTTGGTGTTACTCCTCTCTTTTTGTTGCTATTTGTTTCGGAAAAGAGCAAGAAAAAGTTACAATAAGACCATCCTCAGAAAAAATTTTGGCCATGAAAGTGACACTATAGGGGGCTTGCAATTCAATTTGTCTATAATTGAAGCGGCAACAAATCACTTTTCACAAGAGAACGAGATTGGCAAAGGTGGATTTGGACAAGTTTACAAGGGTGTTCTTCCTGATGGACGACATATAGCTGTAAAGAGACTTTCAAAAAGTTCTACCCAAGGTGCTACTGAATTCAAAAACGAGGTTTTATTAATAGCCAAACTTCAACATAAAAATCTAGTGGCATTTTTAGGATTTTGTCTTGAAGGACAAGAGAAGATACTTATCTATGAATATGTTCCAAACAAGAGCTTGGATTACTTTCTGTTCGATCCTCATTCCGAGAAGTTGTTAAATTGGTTTGAACGCTACAATATTATAGATGGAATTGCTCAAGGAATTCTTTATTTACATGAATATTCTCGTCTCAAAGTTATTCATCGTGATCTTAAACCTAGTAATATATTACTAGATGAAAATATGAATCCTAAAATTTCAGACTTTGGTCTTGCTCGAATCATAGATCAACAACAAGGATCTGCATCTAGAGTTGTTGGAACACTGGGTTATATGTCTCCTGAATACGCAATGCAAGGAAAATTTTTTGAAAAGTCAGATATTTTCAGTTTTGGAGTCATGATTCTCGAAATTATTACAGGAAAAAAGAATGTAGGTTCCAATGTATCATACCGTATTGCAGAGGGTCTTCTAAGCTTAGTATGGAGACAATTTTGCAACCAAAGACCATTATCTGTATTGGACCCAAAAATGAAAGAAAATTGTTCTGAATTTGAAGTTATAAGGTGCATTCAGATTGGTTTATTGTGTGTTCAAGAAAATCCAGACGAAAGACCTACAATAGCAACAATTGTGTCATATCTTAGTAATATCTCACTTGAATTGCCTTCTCCACGAGAACCAGCATTTTTCTTGCATGCTAAAATGGATCCAACAAAAACAATTGCTGGCGAGTCATCAAGTTCTTTCTCTGTTAATGAGATGTCTGAAAAAGATGCAGTAGATCGGTCAACAATATCCACAGTGGTTGTTATGCTAGCAAGTGAGACAATGACACTTCCTATTCCTAATCATTCTGCATTTTCAGTTGGAAGAAAGATCAAAGAAGAGCCAACATCAAATGCTTTTGATAAGGATCCTTTGGTCAATGAAGTATCAATTTCAAATATTCTACCTAGATAA 2853 0.4031 MALNFNFLRLLVFIFSLVSFIMSFPTTTKAKELDYQGPKCSEDRTTFNSTYQVNLITLFSSLSSKATITIFYNDTIIENKDTSNAVYGLFMCRGDVPFDVCGDCVQSATHVLSTECTLSLWGMIWYEQCMVRYSNTRFFSVPKTEPFTPMSNNFNVSINQDIFVPLLVNTVNETADQAAVSLNKYATKEQKVTKLETIFTLAQCTQDLSVGDCRSCLGFAVGQIHECCKGRRGGRVLLPSCNVRFEFYPFYRHGVSKALAPATKYPIMESKYSPDPGYLSHQCSNNQPTNLQKRLTTLLSDLSSKARNSNDNEFYMSNVSNNFFGLYLCRADLPPSLCADCIVNATNRIASECPTSMEAVIWYNHCLLRYSNYSFFRTMGTNPRFKMMNVTDYDDYKSYYKYELWSALTKVAGEIWDRSDRYYTESFVLNDVQRLFVQGQCTKDLATLDCNYCIHDVIETAIPWCCLGSIGGRVLYPSCTLRFELFPFYRNGTDDQPPSTTTTVKTGRSRAVILIIVVPVVALVLLLSFCCYLFRKRARKSYNKTILRKNFGHESDTIGGLQFNLSIIEAATNHFSQENEIGKGGFGQVYKGVLPDGRHIAVKRLSKSSTQGATEFKNEVLLIAKLQHKNLVAFLGFCLEGQEKILIYEYVPNKSLDYFLFDPHSEKLLNWFERYNIIDGIAQGILYLHEYSRLKVIHRDLKPSNILLDENMNPKISDFGLARIIDQQQGSASRVVGTLGYMSPEYAMQGKFFEKSDIFSFGVMILEIITGKKNVGSNVSYRIAEGLLSLVWRQFCNQRPLSVLDPKMKENCSEFEVIRCIQIGLLCVQENPDERPTIATIVSYLSNISLELPSPREPAFFLHAKMDPTKTIAGESSSSFSVNEMSEKDAVDRSTISTVVVMLASETMTLPIPNHSAFSVGRKIKEEPTSNAFDKDPLVNEVSISNILPR* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3176 950 SUPERFAMILY Protein kinase-like (PK-like) 560 872 IPR011009 -
Amo14g3176 950 ProSiteProfiles Protein kinase domain profile. 575 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3176 950 ProSiteProfiles Gnk2-homologous domain profile. 144 250 IPR002902 -
Amo14g3176 950 ProSiteProfiles Gnk2-homologous domain profile. 273 375 IPR002902 -
Amo14g3176 950 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 272 495 - -
Amo14g3176 950 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 502 875 - -
Amo14g3176 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
Amo14g3176 950 SMART serkin_6 575 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3176 950 Gene3D Phosphorylase Kinase; domain 1 536 650 - -
Amo14g3176 950 CDD STKc_IRAK 581 848 - -
Amo14g3176 950 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Amo14g3176 950 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 32 257 - -
Amo14g3176 950 Gene3D Transferase(Phosphotransferase) domain 1 651 854 - -
Amo14g3176 950 ProSiteProfiles Gnk2-homologous domain profile. 381 488 IPR002902 -
Amo14g3176 950 ProSitePatterns Protein kinases ATP-binding region signature. 581 603 IPR017441 GO:0005524
Amo14g3176 950 Pfam Salt stress response/antifungal 399 484 IPR002902 -
Amo14g3176 950 Pfam Salt stress response/antifungal 169 247 IPR002902 -
Amo14g3176 950 Pfam Salt stress response/antifungal 40 135 IPR002902 -
Amo14g3176 950 Pfam Salt stress response/antifungal 285 373 IPR002902 -
Amo14g3176 950 Gene3D - 277 375 IPR038408 -
Amo14g3176 950 Gene3D - 147 250 IPR038408 -
Amo14g3176 950 Gene3D - 382 488 IPR038408 -
Amo14g3176 950 Gene3D - 34 138 IPR038408 -
Amo14g3176 950 Pfam Protein kinase domain 576 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3176 950 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 257 - -
Amo14g3176 950 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 272 495 - -
Amo14g3176 950 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 502 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3176 Amo-Chr14 131472199 131485575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3176 273 899 Receptor kinase-like Gene Family AT4G05200 43.465 4.77e-172 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo14g3176 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3176 - - ahf:112797275 1556.19