Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3165 ATGGGAATGTCAGCACCACCACCACCACCACCAACGGTGCTGCTGTTGCCGGAAGTGGTAGTAGCCCTCTCACCAGTGCTTCCAGCAACATCAGCGCCGGTGAAGAACAACAACAACATGCTTCTTCTCCATGGTAGTAGTGGCTTCATGAATCAGCCTCATTGTGAGAGGAAATTAGTGAGAAAAAGAATGGCTTCTGAGATGGAACTTCACCCTTCCATAACCAACACCAACACCACCACCACCACCATTTCTGAGTATCCTAGGTTTCCTCGTAGAACCACCAACAACATCAACACCTCCTCTTTCATTCAAAAGGGCTCCCCTGTTGGTACAGGTAGTAATTGTAACTATCCTTATAATAATAATAACAATAACAATAATAATATTAATAATAACAATAATAGTAATAGTATTAGTGATGTTGTTGTATCAAGAGATAACGTTACTATTCCAAATTACCCCATTGTGACGCTCACAACCAACTACTCCACTATGATGCTACCTTCTCTTTCATCATCTTCATCATCGTCATCATCTTCTTCCACCAATCTCATCAACACCGTCAATTCTTCCTCGCCCTCAATACCCTCCACAACCATAACCGTTTCGGCTCCAAACTACGCTCAACACTTCAATCAAGAAATCCTACTTGACAACAATCAAAACACCACATCACCTGCAGTTTGCGGATTCTCCGGTCTGCCACTCTTTCCATCTTCACAATCGCAGAGAAACATAAGGAACAACTCTGCAAATATTGTTGAGGTTGTTACTTCTTCGCCTTCTTCCATGGATGAAAGCTCAGCCGCTTCTAATTGGATCGATGGAATATTGAAGGATCTAATTCACAGCTCTAATAGTGTCTCAATCCCTCAGCTCATCAACAACGTCAGGGAGATTATATACCCTTGCAACCCAAACTTGGCCATGCTTCTTGAGTACAGGCTCCGCCTCCTCACTTCTGACTCCTCCTCCGCCGCCGTGCCCGCAGCACCACCGCCACCACCGCCTCCACAAAACAAAACTCCGGTTATGAAGCAAACAAATACTTCAAACATGCATGCTTACGGTGCTATGCATTTTCAAGATTCATCTTTGAATCAGTACTGGCCTGTAGTACCGCCAACGCCGTTAGATTCTAACAACAACAATTCAGTTTCGTTGGCCAATACTTTACCATCACCGCCACCGCCTCCTCCGCCGCCACAGCCACCGCAACAAGAGAAACCCGAAGAAGATCTTGTTACAGCACCGGCAACCACCACGAGCACCGCCACCGCCACAGAAATGGCGGTGCTAACGAGAAAGAAAACCGAGGAGATGAATCAACAGAAGAAGAAAGACGAAGAAGGCTTGCACCTCCTCACACTACTCCTCCAGTGCGCAGAAGCAGTTTCAGCGGAGAATCTAGAAGACGCGAACAAGATGCTTCTAGAAATTTCTCAACTGTCGACGCCGTTCGGCACATCAGCGCAACGCGTGGCAGCGTATTTCTCGGAAGCCATATCCGCAAGGCTGGTCAGCTCTTGCCTCGGAATCTACGCAACGCTGCCAATCGTTCCTCACAGCCAGAAAGTGGCTTCCGCTTTCCAAGTCTTCAACGGAATCAGCCCCTTCGTCAAGTTCTCCCACTTCACCGCCAACCAAGCCATTCAAGAAGCGTTCGAGAGAGAAGAAAGGGTTCACATCATAGATCTAGATATAATGCAAGGCCTCCAGTGGCCTGGCCTCTTCCATATTCTGGCTTCCAGGCCCGGTGGGCCTCCTTACGTGAGACTCACGGGCCTTGGAACCTCTATGGAAGCGCTCGAGGCCACTGGTAAGCGGTTATCGGATTTTGCCAATAAGCTTGGCCTTCCGTTTGAATTCTTTGGCGTTGCGGAGAAAGTTGGGAACGTTGATCCTGAGAGGCTTAATGTTAGTAAGGCTGAGGCTGTTGCTGTTCATTGGTTGCAGCATTCTCTTTATGATGTTACTGGTTCGGACACAAATACTTTGTGGCTTTTGCAGAGGTTGGCACCTAAGGTGATAACAGTGGTAGAGCAAGACCTAAGCAACACAGGTTCATTCTTGGGAAGGTTTGTGGAAGCCATACACTACTACTCAGCACTATTTGACTCCCTTGGTTCAAGCTATGGAGAAGAGAGTGAGGAGAGACATGTGGTGGAGCAGCAACTCCTCTCAAGGGAGATTCGGAATGTTCTAGCTGTTGGGGGTCCATCAAGGACTGGTGAACCAAAGTTTCATAACTGGAGGGAGAAGCTTCAACAATGTGGATTTAGAGGCATATCACTAGCTGGTAATGCTGCTACACAAGCAAGTTTGTTACTTGGTATGTTCCCTTCTGAAGGGTACACTTTGGTGGAGGACAATGGTATTCTTAAACTTGGTTGGAAGGATCTTTGTTTGCTCACTGCTTCAGCTTGGAGACCACCCTATACCACTGCAATGGCTCATCATCATAGTTAA 2472 0.4713 MGMSAPPPPPPTVLLLPEVVVALSPVLPATSAPVKNNNNMLLLHGSSGFMNQPHCERKLVRKRMASEMELHPSITNTNTTTTTISEYPRFPRRTTNNINTSSFIQKGSPVGTGSNCNYPYNNNNNNNNNINNNNNSNSISDVVVSRDNVTIPNYPIVTLTTNYSTMMLPSLSSSSSSSSSSSTNLINTVNSSSPSIPSTTITVSAPNYAQHFNQEILLDNNQNTTSPAVCGFSGLPLFPSSQSQRNIRNNSANIVEVVTSSPSSMDESSAASNWIDGILKDLIHSSNSVSIPQLINNVREIIYPCNPNLAMLLEYRLRLLTSDSSSAAVPAAPPPPPPPQNKTPVMKQTNTSNMHAYGAMHFQDSSLNQYWPVVPPTPLDSNNNNSVSLANTLPSPPPPPPPPQPPQQEKPEEDLVTAPATTTSTATATEMAVLTRKKTEEMNQQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPIVPHSQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFGVAEKVGNVDPERLNVSKAEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVITVVEQDLSNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPYTTAMAHHHS* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3165 823 MobiDBLite consensus disorder prediction 373 391 - -
Amo14g3165 823 Pfam GRAS domain family 456 811 IPR005202 -
Amo14g3165 823 MobiDBLite consensus disorder prediction 373 424 - -
Amo14g3165 823 MobiDBLite consensus disorder prediction 169 193 - -
Amo14g3165 823 ProSiteProfiles GRAS family profile. 446 811 IPR005202 -
Amo14g3165 823 MobiDBLite consensus disorder prediction 392 409 - -
Amo14g3165 823 PANTHER PROTEIN SCARECROW 202 813 - -
Amo14g3165 823 MobiDBLite consensus disorder prediction 329 343 - -
Amo14g3165 823 MobiDBLite consensus disorder prediction 326 347 - -
Amo14g3165 823 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 202 813 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3165 Amo-Chr14 131200419 131204295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3165 453 811 GRAS Transcription Factor Family AT5G41920 57.337 3.19e-141 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo14g3165 GRAS 4.2e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3165 - - gmx:100803919 948.732