Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3153 ATGGTGGACTTGTTGTCAAACAGTAATAAGCCTATTCTATCTAGATGCTCTGCTGGAGGATTGGCTGCTATATTGAACTGCGATTGCTTCAAATCCTTCCTACCAAATGGCACCAGAGTGAAATGCGTGCTAGATGTCGGCTATTTTATCCATGTACCAGATGTCTCCGGAACAAAGCACATTGAAAATTTCTACAAAGGAGTTGTTGAAACTCATGGATCAGCAAAGTATTTGTCCAAGTCCTGCACTTCAAAATATGGTGCTAGCCTGTTCTTGGCTATTGGTAAGGTGAAACTTAAAAATACCATCTTTGGAATTTGA 321 0.4019 MVDLLSNSNKPILSRCSAGGLAAILNCDCFKSFLPNGTRVKCVLDVGYFIHVPDVSGTKHIENFYKGVVETHGSAKYLSKSCTSKYGASLFLAIGKVKLKNTIFGI* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3153 106 PANTHER PECTIN ACETYLESTERASE 7 5 90 - -
Amo14g3153 106 Pfam Pectinacetylesterase 5 87 IPR004963 GO:0016787
Amo14g3153 106 PANTHER NOTUM-RELATED 5 90 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3153 Amo-Chr14 130930556 130931679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3153 1 84 Carbohydrate Esterase AT5G45280 58.333 9.68e-27 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3153 K19882 - sind:105164984 111.694