Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3097 ATGGAATCGAACACAGACATGTTCAGGGTACCTTCTGCAGGAGGAGGAGGAGGAGGAACGGGACCATCGCCTTCGTCTTCGTCTTCGTCTTCCTCTTTGGTTTCTTCGTCGTCTTCGTCATTGTCGTCTTCTAATTCTAGAAGGTTCGGAACTATTTCTCCCTCTAACATCATTAACGCACCGCTGTCGCTATTATTGGAATATTCAGGGATTCTTCGCAACAATAACAACACCACCACCACCAGGTCGAATTTCAATAACCAKGAACCTAACCCTAACCCTAATTCCGAGCCTTCCGTAAATGACGGCGAGTTATCGATCAGGATCATTAGTCCTTCCGAACACGATAATCACGATAATCATCGTCACAGGGAGGAGCAACCTTCGTCTTCTGGTGGGGGTGGTTTGGTTGTGGGGCTTCCTCACGATGAGGGTGGGTCCGTTATGCCCAATTCGAGCACCGGAGACACCGGGATTGGGAACGGGAATGGGATTGGAAACGGCGACGCGGGGACCGGCGGTGAGGGGGGCGGCAATGGGAGGGATTCTTCTTACCAGAGGTATGATATTCAGCATGCTGCAAGGTGGGTGGAGCAGGTTCTTCCGTTCTCTTTGCTCCTCTTGGTGGTCTTCATCCGCCAGCATTTACAAGGGTTTTTTGTTACAATTTGGATTGCGGCTGTCCTTTTCAAGTCGAATGACATTCTAAGAAAACAAACAGCTCTGAAGGGAGAGAGGAAAATACCTATTCTCATTGGGATTTCTGTTGCATTTTCACTTCATGTGATTAGCATCTATTGGTGGTATCAGAATGATGATCTGATGTATCCGCTGGTCATGCTTCCTCCGAGAGAGATACCGCCTTTCTGGCATGCAATTTTCATCATCATGGTTAATGACACTTTGGTCCGCCAGGCTGCAATGGTATTCAAGTGTATATTGTTGATCTATTACAAGAACAGCAGAGGCCGAAATTATCGTAGGCAGGGGCAAATGCTGACTCTAGTTGAGTACCTTCTTTTGCTATACCGTGCCTTGCTGCCGACACCGGTTTGGTATCGTTTCTTTCTAAACAAAGAATATGGAAGCCTTTTTTCATCATTGATGACAGGACTGTATCTAACATTTAAGCTCACATCCGTGGTTGAAAAGGTGCAAGCCTTCTTTGCTGCAGTGAAGGCATTGTCACGGAAAGAAGTTCATTATGGTTCTTATGCAACATCAGAGCAGGTGATTGCGGCTGGTGATCTTTGTGCTATTTGTCAAGAGAAGATGCATGCTCCAATATTACTTCGTTGTAAACACATCTTCTGTGAAGATTGTGTATCAGAGTGGTTTGAGAGGGAAAGGACCTGCCCATTGTGCAGGGCTTTGGTAAAACCAGCAGACTTGAGGTCATTTGGTGATGGTTCTACTAGTTTATTCTTCCAGTTATTCTAA 1440 0.4611 MESNTDMFRVPSAGGGGGGTGPSPSSSSSSSSLVSSSSSSLSSSNSRRFGTISPSNIINAPLSLLLEYSGILRNNNNTTTTRSNFNNXEPNPNPNSEPSVNDGELSIRIISPSEHDNHDNHRHREEQPSSSGGGGLVVGLPHDEGGSVMPNSSTGDTGIGNGNGIGNGDAGTGGEGGGNGRDSSYQRYDIQHAARWVEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILRKQTALKGERKIPILIGISVAFSLHVISIYWWYQNDDLMYPLVMLPPREIPPFWHAIFIIMVNDTLVRQAAMVFKCILLIYYKNSRGRNYRRQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQAFFAAVKALSRKEVHYGSYATSEQVIAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3097 479 MobiDBLite consensus disorder prediction 109 128 - -
Amo14g3097 479 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 27 479 - -
Amo14g3097 479 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 27 479 IPR044235 GO:0061630|GO:1904294
Amo14g3097 479 MobiDBLite consensus disorder prediction 19 54 - -
Amo14g3097 479 SMART ring_2 418 455 IPR001841 -
Amo14g3097 479 Pfam Zinc finger, C3HC4 type (RING finger) 416 459 - -
Amo14g3097 479 CDD RING-HC_RNFT1_like 417 456 - -
Amo14g3097 479 SUPERFAMILY RING/U-box 409 461 - -
Amo14g3097 479 MobiDBLite consensus disorder prediction 147 161 - -
Amo14g3097 479 MobiDBLite consensus disorder prediction 74 102 - -
Amo14g3097 479 ProSiteProfiles Zinc finger RING-type profile. 418 456 IPR001841 -
Amo14g3097 479 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 393 466 IPR013083 -
Amo14g3097 479 MobiDBLite consensus disorder prediction 1 54 - -
Amo14g3097 479 MobiDBLite consensus disorder prediction 74 184 - -
Amo14g3097 479 ProSitePatterns Zinc finger RING-type signature. 433 442 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3097 Amo-Chr14 130159269 130164004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3097 47 479 C3H Transcription Factor Family AT5G01960 67.347 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3097 - K22379 aip:107639742 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3097 14 130159269 130164004 Amo14g3097 14 130159269 130164004 ECH