Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3091 ATGAGCACAACCAGCACGGGTACTATGATTTCAAATAGGAGAAGGATACATGGATATGTTTTGGCTGTTTCATTTTGTTATTTAATTTCCACAACAGTGGCACAGAGCACACACCCCTCAGAAGTGAATGCATTGTTACAAATCAAGAAAAGTTTGATTGATCCCTTAAACCATTTGTGGAACTGGAACAAAGGTGATCCATGTACATCAAATTGGAATGGTGTCTTGTGTCCTCTAAATGTTGGGGCTGATGGTCATTTCCATGTCAAAGAGCTCTACTTAATGACTATGAATCTCTCTGGAAATTTGGTACCCCAACTTGGTCAGCTATCTCAACTAGAGATAATGAACTTCATGTGGAATAACATAACAGGAAGAATACCCAGGGAGATAGGAAATATCACATCATTGAGACTCTTGCTCCTGAATGGAAATGCACTATCAGGTAATTTACCATATGAGCTTGGCAATCTTCAAAATCTAAACAGATTTCAAGTTGATCAAAACCAACTCTCCGGTCCAATACCGCCTTCATTCGCCAACTTGAGCTCTGTCAAGCACATCCACATGAACAACAACTCATTTAGTGGTCAAATTCCTCCCAATCTTTCAAACCTATCCAACCTCCTTCACTTGCTTCTGGATACCAATAATTTATCTGGCTATCTTCCACCAGAATTCTCCATGTTACCCCAGCTGCGGATACTCCAACTTGATAACAATCACTTCACAGGGAGCAGAGTTCCTTCTTCCTATGCAAACTTATCTAGACTAGCAAAATTAAGTCTCAGAAACTGCAGTTTGCTAGGAGAAGTGCCTGATCTCAGTTCAATACCACAGCTTTACTATCTAGATCTTAGCTGGAACAATCTTATTGGACCCATACCATCGAAAAAACTTGCTGAAAATATGACTACCATTGATCTTTCTAATAACAATCTGAATGGATCAATTCCTGGATACTTCTCAGAGCTACCTTCTCTTCAAAGATTGTCTCTTGAGAACAACAACTTTTCAGGATCAATCTCTGCTAAGATATGGCAGAAGATGACTCTCACTACTAATGCTAAATTAACAATCGACCTACGAAACAACTCACTTTCAAGAATTTTGGGAGATCCGAGTCCTCCGCCAAACGTCACCTTAAGGCTTGGAGGAAATCCTATATGTAAGAGTTCTCAAACTAGTGGAATATTGGCCAAACAATGTGGATTTGAAGGAGAAGAAGAAGACAATTACTTAACAAATTCAACAACTACATGTCCCCCTCAAGCTTGTTCAGTGAATGATTTCTTTGAATATGTCCCAGATTCACCTATTCCTTGCTTTTGTGCATCACCTCTTAGAATTGGATACCGGCTGAAAAGCCCGAGTTTTTCTTTCTTCCCACCATACAAAGCTTCATTTAGATCATATGTTACCCATGCTTTGAACTTGGACTTCTATCAGCTATCAATAGATTCATATTCTTGGGAAGAAGAAGAAACTCGTCTTAGGATGTATTTGAAACTCTTTCCTGAGGCTAGTTATTCACACAATGAGTTCAATTCATCTGAGGTCTATCGAATGCGAAGCATATTCTCATCATGGAATTTTGGTGGAAGTGATTTTTATGGGCCATATGAACTTTTGAATTTCACCCTTGAGGGACCTTATGCATATTTAATTACAAAATCAGAAAAGAGCAAAAGTAGCAGATTGGAAATAATTTTTGCTGTAGTAGCAGCTGTGGCAGTTGTTATAGCAATCTCAGCAATAGTAACTCTCATTATTCTAAGAAGAGATATCAAAAACCAGGACACATTTTCGAGAAGACGTCGCTCCTCTAGTATTCCTATCAAAATAGATGGTGTAAAAGAATTCACTTTCAAAGAAATGGTTCTTGCCACTGATAGTTTTAGCAGTTCGAATCAAGTCGGCCGAGGAGGTTATGGAACCGTTTATAAAGGCACTCTACCTGATGAAACAATTGTTGCCATAAAGAGAGCACAAGAAGATTCCCTACAAGGAACAAGGGAATTCTTGAATGAGATTGAACTATTATCGAGGTTACATCATCGAAATCTAGTCTCCTTGATTGGATATTGTGATCAAGAAGGGGAGCAGATGCTTGTTTATGAATTTATGCCTAATGGCAACTTACGCGATTGGCTTTCAGGCACAAAGGGAAACTTAACATTTGGTATGAGATTGCGCATCGCGATTGGTTCAGCCAAAGGAATACTATATCTGCATACTGAGGCGAATCCTCCGATATTCCATCGAGATATCAAAGCATCAAACATACTCCTAGACTCCAAGATGATTGCTAAAGTTGCAGATTTTGGACTGTCGCGGCTTGCACCACTGCTAGATGAAGGGAATGAACCTAAATATGTGTCAACAGTTGTGAAGGGAACACCAGGTTATCTGGATCCAGAGTACTTGTTAACTCATAAATTGACAGATAAGAGCGATGTCTATAGTCTTGGAGTTGTGTTTATGGAGCTTTTGACTGGCATGCAGCCAATATCACATGGGAAAAACATTGTTCGCGAGGTGAATATGGCTTATAATTCAGGCATGATATTTTCCATCATAGACAGTAAAATGGGTTCCTACCCCTCAGATTGTATTGAGAGATTCTCAACTCTGGCCATAAATTGTTGCCATGATGTTACTCAGAAGAGACCATCAATGCTTGATGTTGTGAGGGAGCTTGAAAACATCGCCGCAATGCTGCCGGGAACAGAAACTTCTTTCTCAGATATCATTTGCCATAATGACAGTTCAGTGCAATCATCATCATCATCATCATTCATGCCAAGTAAGGACCATCATGGATCTTCATCTGCTTCAGAAATTTGCCTTGTTAGTGGTGCCATTTCAACAATACTTCCACGTTGA 2886 0.3947 MSTTSTGTMISNRRRIHGYVLAVSFCYLISTTVAQSTHPSEVNALLQIKKSLIDPLNHLWNWNKGDPCTSNWNGVLCPLNVGADGHFHVKELYLMTMNLSGNLVPQLGQLSQLEIMNFMWNNITGRIPREIGNITSLRLLLLNGNALSGNLPYELGNLQNLNRFQVDQNQLSGPIPPSFANLSSVKHIHMNNNSFSGQIPPNLSNLSNLLHLLLDTNNLSGYLPPEFSMLPQLRILQLDNNHFTGSRVPSSYANLSRLAKLSLRNCSLLGEVPDLSSIPQLYYLDLSWNNLIGPIPSKKLAENMTTIDLSNNNLNGSIPGYFSELPSLQRLSLENNNFSGSISAKIWQKMTLTTNAKLTIDLRNNSLSRILGDPSPPPNVTLRLGGNPICKSSQTSGILAKQCGFEGEEEDNYLTNSTTTCPPQACSVNDFFEYVPDSPIPCFCASPLRIGYRLKSPSFSFFPPYKASFRSYVTHALNLDFYQLSIDSYSWEEEETRLRMYLKLFPEASYSHNEFNSSEVYRMRSIFSSWNFGGSDFYGPYELLNFTLEGPYAYLITKSEKSKSSRLEIIFAVVAAVAVVIAISAIVTLIILRRDIKNQDTFSRRRRSSSIPIKIDGVKEFTFKEMVLATDSFSSSNQVGRGGYGTVYKGTLPDETIVAIKRAQEDSLQGTREFLNEIELLSRLHHRNLVSLIGYCDQEGEQMLVYEFMPNGNLRDWLSGTKGNLTFGMRLRIAIGSAKGILYLHTEANPPIFHRDIKASNILLDSKMIAKVADFGLSRLAPLLDEGNEPKYVSTVVKGTPGYLDPEYLLTHKLTDKSDVYSLGVVFMELLTGMQPISHGKNIVREVNMAYNSGMIFSIIDSKMGSYPSDCIERFSTLAINCCHDVTQKRPSMLDVVRELENIAAMLPGTETSFSDIICHNDSSVQSSSSSSFMPSKDHHGSSSASEICLVSGAISTILPR* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3091 961 ProSiteProfiles Protein kinase domain profile. 633 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3091 961 Pfam Protein tyrosine and serine/threonine kinase 636 900 IPR001245 GO:0004672|GO:0006468
Amo14g3091 961 SMART serkin_6 633 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3091 961 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 20 939 - -
Amo14g3091 961 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Amo14g3091 961 Gene3D Ribonuclease Inhibitor 195 404 IPR032675 -
Amo14g3091 961 SUPERFAMILY L domain-like 53 391 - -
Amo14g3091 961 CDD STKc_IRAK 639 903 - -
Amo14g3091 961 ProSitePatterns Protein kinases ATP-binding region signature. 639 661 IPR017441 GO:0005524
Amo14g3091 961 Pfam Leucine rich repeat 279 338 IPR001611 GO:0005515
Amo14g3091 961 Gene3D Ribonuclease Inhibitor 38 194 IPR032675 -
Amo14g3091 961 Gene3D Transferase(Phosphotransferase) domain 1 709 915 - -
Amo14g3091 961 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 20 939 - -
Amo14g3091 961 Gene3D Phosphorylase Kinase; domain 1 604 708 - -
Amo14g3091 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672|GO:0006468
Amo14g3091 961 SUPERFAMILY Protein kinase-like (PK-like) 618 935 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3091 Amo-Chr14 129957558 129965240 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3091 14 912 Receptor kinase-like Gene Family AT5G01950 60.398 0.0 1058
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Amo14g3091 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3091 - - gmx:100815005 1213.75