Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3074 ATGAACACTTCAATGTGCAATTCATGGAATGGAGTTACCTGCAATCCCAAGGGCACAAATGTAATTTCACTGAGGCTACCAGGTGTTGGTTTGAGAGGTTCTCTGCCACCAAACACAATTGGCAAGCTCAATGGTCTCACAAGTCTTAGTCTAAGGTCTAACACATTGAGTGGCAAAATCCCAAATGACATTCTTGCCCTTCATTCCCTAAGGTTTCTATATCTTCAACATAACAATTTCTCAGGTGAATTTCCAAATTTTCTTCCACCTAAGCTTGTGCTTCTTGATTTGTCACATAACTCTTTCACAGGACAAATTTCAGACTCAATCCAAAATTTGACTAATCTAACTGGTTTGTTCCTCAAGAACAATTCACTTATAGGGCCTATTCCTAATGTAACCCTTCCTAGTCTTAAGGATTTGGATTTGAGCTTTAACAACCTTAATGGTTCAATTCCTTTAGCATTTCATAGGTTTCAATCTTCATCATTTGATGGGAATTTGATGCTATGTGGACCACCTTTGACAAAACAATGTTCCTCATCAAGTCCTCTTAGTAGTCCAATGTTGTCTCCAATAATAGTATCTCAAAATTCAAGTTATGTTTCCAAGAAGAGGCCGATTCTCGGGGTGGTGATCGCGGCCGCTTTGGGAGGTTTCGGACTACTTTTTCTACTAGTTTTGATGTTGGTGTTGTGTTTTCTTAAGAGAGTTGGTGAACAAAATGAGGCACCAAAAGAAAGTAAACTTGATGAGAAGCTTAGGGAGGATTTTGGGAGTGGTGTGCAAGAACCTGAGAAGAACAAGTTGGTATTTTTCGGAGGGTGTTCTTATAACTTTGATCTTGAGGATTTGTTGAGAGCTTCAGCTGAAGTTCTTGGTAAGGGAAGTTGTGGAACAACTTATAAGGCAGTCTTGGAAGAAGGGACAGTAGTTGTTGTTAAGAGGCTGAAGGAAGCTGCAATTGGGAAGAGAGAATTTGAACAGCAAATGGAAACTGTGCAAAAGCTTGATCAGCATCCAAATGTTGTTCCATTTAGTGCTTACTATTATTCCAAGGATGAGAAGCTAGTGGTTTATGATTACCTACCATTTGGAAGCTTTTCCAAGTTATTGCATGGAACAAGGGAAACTGGAAGAACTCCACTAGATTGGGACACCAGATTGAAGATAATGCTTGGAGCTGCTAAGGGTGTTGCTCATATTCATTCTGCAAGTGGAAGGAAATTTGTCCATGGCAATATAAAATCATCTAATGTGCTACTCTTAGGTGATCTACAAGGCTGCATATTGGATTTCGGCTTAGCTCCTCTAGCGAGTTTCTCAGGCTCCTTTAGGAGTCCTGGATATCGAGCCCCCGAGGTTATTGAGACCCAAAAATCCACACAAAAATCTGATGTGTACAGCTTTGGGGTTCTCCTTCTCGAGATGTTGACCGGCAAAACACCGATTCAGTATTCAGGACATGATGATCCGATTGATCTTCCGAGGTGGGTTCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGCTAATGAGGTATCCAAATATTGAGGAAGAATTGGTGCAAATGCTGCAACTTTCAATGGCATGTGTTGCAATGGTTCCTGACACAAGACCCTCAATGGAGGAAGTTGTAAGGGTTATTGAAGAAATCATAGGATCCTATTCTTAG 1689 0.4067 MNTSMCNSWNGVTCNPKGTNVISLRLPGVGLRGSLPPNTIGKLNGLTSLSLRSNTLSGKIPNDILALHSLRFLYLQHNNFSGEFPNFLPPKLVLLDLSHNSFTGQISDSIQNLTNLTGLFLKNNSLIGPIPNVTLPSLKDLDLSFNNLNGSIPLAFHRFQSSSFDGNLMLCGPPLTKQCSSSSPLSSPMLSPIIVSQNSSYVSKKRPILGVVIAAALGGFGLLFLLVLMLVLCFLKRVGEQNEAPKESKLDEKLREDFGSGVQEPEKNKLVFFGGCSYNFDLEDLLRASAEVLGKGSCGTTYKAVLEEGTVVVVKRLKEAAIGKREFEQQMETVQKLDQHPNVVPFSAYYYSKDEKLVVYDYLPFGSFSKLLHGTRETGRTPLDWDTRLKIMLGAAKGVAHIHSASGRKFVHGNIKSSNVLLLGDLQGCILDFGLAPLASFSGSFRSPGYRAPEVIETQKSTQKSDVYSFGVLLLEMLTGKTPIQYSGHDDPIDLPRWVQSVVREEWTAEVFDLELMRYPNIEEELVQMLQLSMACVAMVPDTRPSMEEVVRVIEEIIGSYS* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3074 562 PRINTS Leucine-rich repeat signature 135 148 - -
Amo14g3074 562 PRINTS Leucine-rich repeat signature 92 105 - -
Amo14g3074 562 SUPERFAMILY Protein kinase-like (PK-like) 291 554 IPR011009 -
Amo14g3074 562 Pfam Leucine rich repeat 34 80 IPR001611 GO:0005515
Amo14g3074 562 PANTHER OS05G0588300 PROTEIN 2 558 - -
Amo14g3074 562 SUPERFAMILY L domain-like 5 175 - -
Amo14g3074 562 Gene3D Ribonuclease Inhibitor 91 181 IPR032675 -
Amo14g3074 562 ProSiteProfiles Protein kinase domain profile. 287 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3074 562 Gene3D Ribonuclease Inhibitor 1 90 IPR032675 -
Amo14g3074 562 Gene3D Phosphorylase Kinase; domain 1 256 362 - -
Amo14g3074 562 PANTHER OS05G0480400 PROTEIN 2 558 - -
Amo14g3074 562 Gene3D Transferase(Phosphotransferase) domain 1 364 561 - -
Amo14g3074 562 Pfam Leucine Rich Repeat 91 113 IPR001611 GO:0005515
Amo14g3074 562 Pfam Protein kinase domain 290 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3074 Amo-Chr14 129671906 129674320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3074 5 557 Receptor kinase-like Gene Family AT5G58300 60.963 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo14g3074 Pkinase 5.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3074 - - gmx:100810832 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3074 14 129671906 129674320 Amo14g3074 14 129671906 129674320 ECH
Amo14g3074 14 129671906 129674320 Amo04g2143 04 91575818 91578273 hybridization