Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3058 ATGTTTATTACGGAGAATATTAGTAATGGTAATAATTTATTGGGTCGTAGGAAGGCAATTGAGGAGCTTGAGAAGGGTCGTGAATTTGCAAACAAGCTTAGGGTTGTGATCAATGGTGGTGATGGTGGTGTTGATGGTGAACAACTTGTGGAGAAGGTTCTTATGTCATTCACAAACTCACTCTTGATCTTGAACAAGAACCCTAGTTCTAATAATTGTGATGAGGTCTGTGATGTTCCTTCTTCATGTGGGATCAATCCAACCAAGTCTGAGGATTCACTTGAGAGTAATTGCAAGAGCTCCGTTCATAAAGAACGTAGAGGATGTTACAAGAGAAGAAGGACTTCACAAGTATTGGAGAAGGAGTCTGAAGCTCCAATTGATGATGGTCATCAGTGGAGAAAATATGGCCAAAAGGTTATCCTTAATACCAAACATCCAAGGAACTATTACAGATGCACTCACAAATATGACCAAGGTTGTCTAGCAACAAAACAAGTGCAACAAGTTGAAGATGAACCAACACTTTACAAGACCACATACTATGGAAACCACACTTGTAGGAACACCCTGAACCCTACAATCATATTGGATGATTCCAATGATTCTCCTTCACAATCTTCAATGTTCCTCAGCTTTGATAATTCCCTCCCAACAAAACAAGAATGTCCTATTTTCCTCTCATCATCATCTTTAGTAATCAAGAAGGAAGAGGAGTTCAAGGAGGAGGACCTTAATAATAATAATAATAATGTTCCTTCATGTTCTTCAAATGATTACATGATATCTTCGGAGCTTACTTTTGATAACTACTCAACGCATCATCATGTTAATGCTTTATCATCAACACTTGACTCAGATGATGTTATTTCTTATGATCCTTCTCACTTTGATGATGCCATTGAGTTTCTTTGTTATTAA 921 0.3757 MFITENISNGNNLLGRRKAIEELEKGREFANKLRVVINGGDGGVDGEQLVEKVLMSFTNSLLILNKNPSSNNCDEVCDVPSSCGINPTKSEDSLESNCKSSVHKERRGCYKRRRTSQVLEKESEAPIDDGHQWRKYGQKVILNTKHPRNYYRCTHKYDQGCLATKQVQQVEDEPTLYKTTYYGNHTCRNTLNPTIILDDSNDSPSQSSMFLSFDNSLPTKQECPIFLSSSSLVIKKEEEFKEEDLNNNNNNVPSCSSNDYMISSELTFDNYSTHHHVNALSSTLDSDDVISYDPSHFDDAIEFLCY* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3058 306 ProSiteProfiles WRKY domain profile. 122 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g3058 306 PANTHER WRKY TRANSCRIPTION FACTOR 70-RELATED 13 278 - -
Amo14g3058 306 SUPERFAMILY WRKY DNA-binding domain 125 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo14g3058 306 SMART WRKY_cls 127 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g3058 306 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 278 IPR044810 GO:0003700
Amo14g3058 306 Pfam WRKY DNA -binding domain 128 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g3058 306 Gene3D WRKY domain 112 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3058 Amo-Chr14 129301412 129304291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3058 12 187 WRKY Transcription Factor Family AT3G56400 41.111 2.22e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo14g3058 WRKY 3.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3058 - - ahf:112797210 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3058 14 129301412 129304291 Amo14g3058 14 129301412 129304291 ECH
Amo14g3058 14 129301412 129304291 Amo04g2073 04 90535848 90538475 hybridization
Amo14g3058 14 129301412 129304291 Amo12g0435 12 7116970 7118519 PCT
Amo12g0435 12 7116970 7118519 Amo14g3058 14 129301412 129304291 PCT