Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3049 CTTCTCCAACCCCGAGTGCTATCTGATGACACTTCATTCAATGATGATGTTTTGGGTTTGATTGTRTTCAAAGCCGGTTTGGATGATCCAAAGGGTAAACTTTCTTCATGGAATGAAGATGATTTAACCCCTTGCAATTGGGATGGTGTGGATTGTGACCTYTCAACAAAAAGGGTCAATTCCCTTGTTCTTGATGGTTTCTCTCTTTCTGGCCATGTTGATAGAGGACTCTTGAGGCTTCAAAATCTAAAGATTCTCTCACTTGCAAGGAACAACTTCACTGGCACCATAAACCCTGATCTTCCTTCATCACTTGGTGGATTGCAAGTTGTTGACTTTAGTGACAACAATCTCTCTGGTTCAATCCCTGAAGGGTTCTTCAACCAATGTGGCTCTCTTAGAACAGTTTCCTTTGCCAAGAACAACCTCACAGGTAAGGTTCCTGATTCCTTGAGCTCATGCTCCACATTGGTGAATGTTAACTTTTCATACAATCAAATTTCTGGTATATTGCCATCTGGGGTGTGGTTCTTGAGGGCAATACAGTCATTTGATCTGTCAAATAACTTGCTTGAAGGAGAGATTCCTGAGGGAATTAAGAATCTGTATGATTTGAGGGAGTTGAATTTGCAGAATAATCACTTTAGTGGAAAGATTCCTGAAGAAATTGGAGGGTGCTTGGTTTTGAAATCAGTGGATTTGAGTGGTAATTTTCTCTCTGGGGAACTTCCTGAGTCAATGCAAAGACTCACTTCATGCACATCACTCAGTTTGCAGAGAAATTCCCTCACTGGAACCATTCCTGATTGGATTGGAGGGTTGAAAAGTCTAGAGATTTTGGATCTTTCAGCTAATGAACTTTCCGGTTGGATTCCGAAATCATTAGGGAATTTAGACTCACTGCTTAGGTTGAATTTGTCCAGGAATCAGTTCACAAGAAACTTGCCGTTTTCGATGGCGAATTGTTCTAAGCTTTCGACATTCGACATAAGCCAGAATGAATTTTCAGGCCATATTCCTTGGTGGATATTCATAATGGGTTTKCAAGGTTCACCTTTCCATGATCTTGAAGTGTTGGATTTGTCATCCAATGCATTTTCTGGTGAGCTTCCATATGGCATTGGGAACCTTAGCAGTTTGCAAGTGTTGAATGTTTCCGGCAACAATATCTCTGGCTCGATTCCTGTGACCATAGGAGAACTCAAATCTTTRTACATTCTTGATTTGAGTGACAACAAGATTAATGGAAGCATTCCTTCTGAAATTCAAGGTGCAMGTTCACTCAGTGAATTGAGGCTACAAAGGAACTTCCTAAGTGGGAGAATTCCAGCCGAAATCGACAAGTGTTCATCTTTAACATCTTTGATACTTTCTCACAACAAGCTTACTGGTTCAATCCCAGCATCAATTGCAAACCTCACCAATCTTCAATATGTTGATTTGTCATGGAATGAAGTCTCTGGAGGTTTACCGAAGGAGCTTACAAATCTTTCGCACCTTCTTGGTTTTAATGTATCCTACAACCAGCTTCAAGGTGAGCTACCAGTGGGTGGATTCTTCAACACCATCTCACCCTCATCTGTCTCCGGCAACTCATTGTTATGTGGTTCTGTTGTCAATCAATCCTGTCCATCCGACCACCCGAAACCTATTGTCTTAAACCCGAATTCTTCAAGTTCCAACTCCAGCATTTCGGCCCAGAATCGCCATCATAAGATCATACTCAGTATCTCAGCTCTTATTGCTATAGGAGCAGCTGCTTTTATAGCCGTTGGTGTGGTGGCTATTACAGTCTTAAACATTCATGTGCGCAATTCAATGGCTCGTTCGGCTGCTCAGTTTGCATTCTCTGGTGGTGAGGACTATAGTGGTTCGCCCGAAAATGATCCAAACTATGGCAAGCTTGTCATGTTTTCTGGTGATGCAGACTTTGCAGATGGAGCTCATAATCTTCTTAATAAAGACAGTGAAATTGGCCGTGGAGGATTCGGAGTTGTTTATCGCACTGTCCTTCGAGACGGCCACTCTGTTGCAATCAAGAAGCTTACAGTGTCCAGTTTGATCAAGTCCCAAGATGACTTTGAAAGGGAAGTGAAAAATCTCGGCAAGGTTAGACACCAAAACCTGGTGACACTCGAAGGCTATTACTGGACTTCATCTTTGCAGCTTCTCATTTATGAGTACTTATCCAAAGGGAGTTTGCATAAACTCCTCCATGATGATAATAACAGCAAAGATGTCTTTTCTTGGAGACAAAGGTTCCGGATTATTCTCGGCATGGCRAAAGGRTTAGCTCATTTGCACCAGATGGACATAATMCATTACAATCTTAAGTCAACCAATGTACTGATTGATTGTTCCAGCGAGGCGAAAATAGGAGAYTATGGCCTAGTAAAGCTATTGCCAATGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGCGCGCTCGGCTACATGGCTCCGGAGTTTGCTTGCCGAACAGTTAAGATAACCGAGAAATGTGATGTGTATGGCTTTGGAATCCTTGTTCTTGAGGTGGTGACTGGAAGAAGGCCTGTGGAATACATGGAGGATGATGTGGTTGTTCTTTGTGACATGGTGAGAGGTGCATTGGAGGAAGGCAAGGTTGAGCAATGTGTTGATGGGAGGCTACTTGGTAATTTCGCAGCCGAAGAAGCGATTCCTGTGATCAAATTGGGGTTGATTTGTGCCTCACAAGTGCCGTCGAACCGGCCGGATATGGCCGAGGTAATCAACATACTAGAGTTAATCCAATGCCCTTCAGAAGGACAAGAGGAGTTAGAATGA 2811 0.4251 LLQPRVLSDDTSFNDDVLGLIVFKAGLDDPKGKLSSWNEDDLTPCNWDGVDCDLSTKRVNSLVLDGFSLSGHVDRGLLRLQNLKILSLARNNFTGTINPDLPSSLGGLQVVDFSDNNLSGSIPEGFFNQCGSLRTVSFAKNNLTGKVPDSLSSCSTLVNVNFSYNQISGILPSGVWFLRAIQSFDLSNNLLEGEIPEGIKNLYDLRELNLQNNHFSGKIPEEIGGCLVLKSVDLSGNFLSGELPESMQRLTSCTSLSLQRNSLTGTIPDWIGGLKSLEILDLSANELSGWIPKSLGNLDSLLRLNLSRNQFTRNLPFSMANCSKLSTFDISQNEFSGHIPWWIFIMGXQGSPFHDLEVLDLSSNAFSGELPYGIGNLSSLQVLNVSGNNISGSIPVTIGELKSLYILDLSDNKINGSIPSEIQGAXSLSELRLQRNFLSGRIPAEIDKCSSLTSLILSHNKLTGSIPASIANLTNLQYVDLSWNEVSGGLPKELTNLSHLLGFNVSYNQLQGELPVGGFFNTISPSSVSGNSLLCGSVVNQSCPSDHPKPIVLNPNSSSSNSSISAQNRHHKIILSISALIAIGAAAFIAVGVVAITVLNIHVRNSMARSAAQFAFSGGEDYSGSPENDPNYGKLVMFSGDADFADGAHNLLNKDSEIGRGGFGVVYRTVLRDGHSVAIKKLTVSSLIKSQDDFEREVKNLGKVRHQNLVTLEGYYWTSSLQLLIYEYLSKGSLHKLLHDDNNSKDVFSWRQRFRIILGMAKGLAHLHQMDIIHYNLKSTNVLIDCSSEAKIGDYGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGRRPVEYMEDDVVVLCDMVRGALEEGKVEQCVDGRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVINILELIQCPSEGQEELE* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3049 936 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 927 - -
Amo14g3049 936 ProSitePatterns Protein kinases ATP-binding region signature. 658 681 IPR017441 GO:0005524
Amo14g3049 936 SMART LRR_typ_2 178 201 IPR003591 -
Amo14g3049 936 SMART LRR_typ_2 274 297 IPR003591 -
Amo14g3049 936 SMART LRR_typ_2 80 104 IPR003591 -
Amo14g3049 936 SMART LRR_typ_2 298 322 IPR003591 -
Amo14g3049 936 SMART LRR_typ_2 497 521 IPR003591 -
Amo14g3049 936 SMART LRR_typ_2 473 496 IPR003591 -
Amo14g3049 936 SMART LRR_typ_2 202 226 IPR003591 -
Amo14g3049 936 SMART LRR_typ_2 377 401 IPR003591 -
Amo14g3049 936 SMART LRR_typ_2 105 129 IPR003591 -
Amo14g3049 936 Pfam Protein kinase domain 653 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3049 936 SUPERFAMILY Protein kinase-like (PK-like) 653 926 IPR011009 -
Amo14g3049 936 SUPERFAMILY L domain-like 275 536 - -
Amo14g3049 936 Pfam Leucine Rich repeat 378 392 IPR001611 GO:0005515
Amo14g3049 936 Pfam Leucine rich repeat N-terminal domain 14 53 IPR013210 -
Amo14g3049 936 Gene3D Transferase(Phosphotransferase) domain 1 729 929 - -
Amo14g3049 936 ProSiteProfiles Protein kinase domain profile. 652 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3049 936 SUPERFAMILY L domain-like 32 343 - -
Amo14g3049 936 Pfam Leucine rich repeat 254 311 IPR001611 GO:0005515
Amo14g3049 936 Pfam Leucine rich repeat 427 485 IPR001611 GO:0005515
Amo14g3049 936 Gene3D Ribonuclease Inhibitor 296 550 IPR032675 -
Amo14g3049 936 Gene3D Ribonuclease Inhibitor 13 232 IPR032675 -
Amo14g3049 936 Gene3D Ribonuclease Inhibitor 233 295 IPR032675 -
Amo14g3049 936 SMART LRR_sd22_2 401 424 - -
Amo14g3049 936 SMART LRR_sd22_2 473 499 - -
Amo14g3049 936 SMART LRR_sd22_2 274 300 - -
Amo14g3049 936 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 927 - -
Amo14g3049 936 Pfam Leucine Rich Repeat 205 226 IPR001611 GO:0005515
Amo14g3049 936 Gene3D Phosphorylase Kinase; domain 1 641 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3049 Amo-Chr14 128957529 128961702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3049 10 933 Receptor kinase-like Gene Family AT5G01890 61.199 0.0 1107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Amo14g3049 Pkinase 3.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3049 - - gmx:100813535 1497.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3049 14 128957529 128961702 Amo14g3049 14 128957529 128961702 ECH
Amo14g3049 14 128957529 128961702 Amo04g2058 04 90358818 90362141 hybridization
Amo14g3049 14 128957529 128961702 Amo12g2528 12 108802238 108805669 PCT
Amo14g3049 14 128957529 128961702 Amo02g2719 02 84215997 84219923 PCT
Amo12g2528 12 108802238 108805669 Amo14g3049 14 128957529 128961702 PCT
Amo02g2719 02 84215997 84219923 Amo14g3049 14 128957529 128961702 PCT