Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3027 ATGAGTTTCAGAGAAGAATCGGTTCCGGAAAGCACTGAGTCAAAATCAGTGAAGCAAAATGGGTTCATAACAGATACTCAGTTAACAATCGATGAGAGCCTTTTGGTTGATCCAAAACTTCTGTTTATAGGGTCCAATATTGGTGAGGGAGCTCATGGTAAAGTCTATGAAGGAAGGTATGGAGAGAGAATTGTTGCAATCAAAGTTTTAAATCGTGGGAGCACTTCTGAAGAAAGAGCTGCCCTTGAAAATCGGTTTGCTCGGGAAGTTAATATGATGTCTCGTGTCCACCATGAGAATCTTGTTAAGTTTATTGGAGCTTGTAAGGATCCTTTGATGGTGATCGTTACAGAATTATTGCCTGGGATGTCACTGAGGAAATACTTAACAAGTATCCGTCCGAAGTTACTAGACCTTCATGTTGCTATAAACTTTGCCCTTGATATTGCTCGGGCCATGGATTGGCTACATGCCAACGGGATCATACATAGAGATCTGAAGCCCGACAATCTGTTGCTTACGGCAAATCAGAAGTCTGTTAAACTTGCAGATTTTGGTCTCGCAAGAGAAGAATCCGTGACTGAAATGATGACAGCAGAAACCGGAACTTACCGATGGATGGCACCAGAGTTGTATAGTACCGTGACATTGCGCCAGGGAGAGAAAAAGCACTACAACAACAAGGTTGATGTGTATAGCTTTGGTATTGTTTTGTGGGAGCTACTAACAAACCGCATGCCTTTCGAAGGGATGTCGAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCTAGCATGCCTGAAGATATATCCCCGGATCTTGCCTTTATCATACAATCATGCTGGGTCGAAGATCCTAACCTGAGACCGAGTTTTAGTCAGATCATTCGCATGCTCAATGCATTTCTCTTCACGCTTTCGCCACCGTCTCCTCCCATGCAAGAGCCTGATGAAATCGAGCCTGAGGAAGCGACGACAAGTAATGGTACCATTACTCAGTATTCCGCCCGGAACAGAGGGAAGTTCGCTTTTATTCGCCATTTGTTTTCTTCAAAGAGGACCAAAAACTAA 1080 0.437 MSFREESVPESTESKSVKQNGFITDTQLTIDESLLVDPKLLFIGSNIGEGAHGKVYEGRYGERIVAIKVLNRGSTSEERAALENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPKLLDLHVAINFALDIARAMDWLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSMPEDISPDLAFIIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPPSPPMQEPDEIEPEEATTSNGTITQYSARNRGKFAFIRHLFSSKRTKN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3027 359 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 9 329 - -
Amo14g3027 359 PANTHER SERINE-THREONINE PROTEIN KINASE 9 329 - -
Amo14g3027 359 SUPERFAMILY Protein kinase-like (PK-like) 40 323 IPR011009 -
Amo14g3027 359 ProSitePatterns Protein kinases ATP-binding region signature. 47 68 IPR017441 GO:0005524
Amo14g3027 359 CDD STKc_MAP3K-like 47 302 - -
Amo14g3027 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Amo14g3027 359 SMART serkin_6 41 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3027 359 Pfam Protein tyrosine and serine/threonine kinase 43 302 IPR001245 GO:0004672|GO:0006468
Amo14g3027 359 ProSiteProfiles Protein kinase domain profile. 41 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g3027 359 Gene3D Transferase(Phosphotransferase) domain 1 123 340 - -
Amo14g3027 359 PRINTS Tyrosine kinase catalytic domain signature 117 130 IPR001245 GO:0004672|GO:0006468
Amo14g3027 359 PRINTS Tyrosine kinase catalytic domain signature 155 173 IPR001245 GO:0004672|GO:0006468
Amo14g3027 359 PRINTS Tyrosine kinase catalytic domain signature 229 251 IPR001245 GO:0004672|GO:0006468
Amo14g3027 359 PRINTS Tyrosine kinase catalytic domain signature 273 295 IPR001245 GO:0004672|GO:0006468
Amo14g3027 359 Gene3D Phosphorylase Kinase; domain 1 29 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3027 Amo-Chr14 128010879 128014622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3027 29 359 MAP Kinase Kinase Kinase AT5G01850 74.366 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Amo14g3027 PK_Tyr_Ser-Thr 2.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3027 - - jre:109021493 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3027 14 128010879 128014622 Amo14g3027 14 128010879 128014622 ECH
Amo14g3027 14 128010879 128014622 Amo04g2019 04 89580902 89583849 hybridization
Amo14g3027 14 128010879 128014622 Amo12g2331 12 104994140 104998020 PCT
Amo12g2331 12 104994140 104998020 Amo14g3027 14 128010879 128014622 PCT