Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3001 ATGGCACTTCCAATTAGCAAAGTTGATTTCTTAATATTTATGTGTCTTATAGGATTAGGGTCAGCTCAATTGTCATCTAATTTTTATGCCACAAAATGTCCCAATGCACTTTCAACAATTAAGTCAGCAGTGAACTCTGCTGTCGCCAAAGAAGCTCGCATGGGAGCTTCCCTTCTTCGCCTTCATTTTCATGATTGCTTTGTTCAAGCAAGTCTACTTTCACTTTTTCTTAGTTTCTATTTTTTTTTAAATGGATGTGATGCATCAGTGCTATTAGATGATACATCAAATTTCACAGGAGAAAAGACAGCAGGTCCAAATGCAAATTCAATAAGAGGTTTTGAAGTGATTGATACCATAAAGTCCCAAGTAGAGAGCTTGTGCCCTGGTGTTGTTTCTTGTGCTGATATTCTTGCTGTTGCTGCTAGAGACTCTGTTGTTGCTCTAGGAGGAGCAAGTTGGAATGTGTTATTGGGAAGAAGAGACTCAACCACTGCAAGTTTAAGCTCTGCTAACTCAGATTTGCCGGCTCCATTTTTTAATCTTAGTGGCCTTATCTCTGCTTTCTCCAACAAAGATCCAACATATGCAAAATCATTGCAAGCAAATTGTCCTAGCGTAGGAGGAGATACCAATTTGTCACCATTTGATGTAACAACACCAAACAAATTTGACAATGCTTACTATATCAACTTGAGAAACAAGAAGGGTCTCTTGCATTCTGATCAACAACTCTTCAATGGTGTATCCACTGATTCCCAAGTCACTGCTTATAGCAACAATGCTGCAACTTTCAACACTGACTTTGGCAATGCAATGATTAAGATGGGAAACCTTAGTCCACTCACTGGGACTAGTGGCCAAATTAGAACCAATTGCAGGAAGACCAACTAA 894 0.3915 MALPISKVDFLIFMCLIGLGSAQLSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQASLLSLFLSFYFFLNGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3001 297 Pfam Peroxidase 41 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo14g3001 297 Pfam Peroxidase 193 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo14g3001 297 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Amo14g3001 297 PANTHER PEROXIDASE 16 192 - -
Amo14g3001 297 PRINTS Plant peroxidase signature 215 230 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo14g3001 297 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo14g3001 297 PRINTS Plant peroxidase signature 231 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo14g3001 297 PRINTS Plant peroxidase signature 271 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo14g3001 297 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo14g3001 297 Gene3D - 277 297 - -
Amo14g3001 297 ProSiteProfiles Plant heme peroxidase family profile. 23 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo14g3001 297 PANTHER PEROXIDASE 72-RELATED 16 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo14g3001 297 Gene3D - 27 175 - -
Amo14g3001 297 PANTHER PEROXIDASE 72-RELATED 193 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo14g3001 297 Gene3D Peroxidase, domain 2 192 276 - -
Amo14g3001 297 Gene3D Peroxidase, domain 2 176 191 - -
Amo14g3001 297 PRINTS Haem peroxidase superfamily signature 217 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo14g3001 297 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo14g3001 297 CDD secretory_peroxidase 23 296 IPR033905 GO:0004601|GO:0042744
Amo14g3001 297 SUPERFAMILY Heme-dependent peroxidases 23 297 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo14g3001 297 PANTHER PEROXIDASE 193 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3001 Amo-Chr14 127352751 127354911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3001 22 297 Peroxidase AT5G05340 55.769 3.67e-112 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3001 K00430 - gmx:100815142 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3001 14 127352751 127354911 Amo14g3001 14 127352751 127354911 ECH
Amo14g3001 14 127352751 127354911 Amo04g1963 04 88130564 88132775 hybridization