Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2997 ATGGCTTCTAGTAGGGAGAGAAGAAGGGAGGCTCTTCAACAAAAGTTGAATCAACTCCGAGATGTTACAAATTCTAGTGGTGTGAACAAAGCTTCAATTATTGTGGACGCATCCAGATACATAGAGGAGTTGAAGCAAAAAGTGGAGGGACTGAATTCCGAGCTTGTAATCCCTGAAACTTCTTCGTCAACCTCTCAAATTGATGATGAACTACCTATGGTGACAGTGGAAACCCTAGAAAAAGGTTTCCACATTAACGTGTATTCAGAGAAGAATTGCCCTGGTATGTTGGTCTCAATACTAAAAGCATTTGAAGAGCTTGGACTTGATGTTCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTTCAAGCAGTGGGTGGAGAAAGTCAAAAGAACAATGATACTATTGACGCACAAGTGGTGAAGCAAGCAGTGATGCAAGCAATCAACAAAAGTAATTACTAA 471 0.4076 MASSRERRREALQQKLNQLRDVTNSSGVNKASIIVDASRYIEELKQKVEGLNSELVIPETSSSTSQIDDELPMVTVETLEKGFHINVYSEKNCPGMLVSILKAFEELGLDVLDARVSCEDTFQLQAVGGESQKNNDTIDAQVVKQAVMQAINKSNY* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2997 156 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 154 - -
Amo14g2997 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 55 IPR036638 GO:0046983
Amo14g2997 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 154 - -
Amo14g2997 156 Gene3D - 2 58 IPR036638 GO:0046983
Amo14g2997 156 CDD ACT_UUR-ACR-like 94 151 - -
Amo14g2997 156 Coils Coil 34 54 - -
Amo14g2997 156 Coils Coil 2 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2997 Amo-Chr14 127188914 127192690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2997 7 124 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 31.333 1.99e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2997 - - gmx:100527466 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2997 14 127188914 127192690 Amo14g2997 14 127188914 127192690 ECH