Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2995 ATGTTCTTCGTCATTTACATTAGTTTTTCTCTCTGTAACTCCAGCTTCGTTTTCTATTTGATTTGTTGTTTTCTGAAATCAAAGTTTGAACTCGTTTTGAAGATTATGGATGATTCAAGCTCAGATTGTCAGCTGAATCAGGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGCCTCTCTCTGTTGTTGATGACCAGTTTGTTCCGAAAGTTAGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTACAGGTTTTTCTACAAGAGTTCGGATCACCAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACTAATCCGAAAGCCGGTTTAAACTGTCCTCCAAGAATTTATATACACACATTGAAGGATGTCGATGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCATACCCCTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTTGTACAATAGAGAATAACGAGGAGGCCGGGATGAGAAGCACACAAAGGAGCGAGAGCATGCATTCATTTTTTAACAAGTTTATCACCCGGAACAGCTTGCTTATTCAGTTCGTCAAACAATACGATAATTGCCTCGGAAGCCGGGAGCAAGCAGAGAGAGAATCAGATGCTGCAGATTTTCATACGGTCATACCGTGTGCAACCAAATCCTCCATTGAAGCTCAGTTTCAAGATGTGTACACTCATCAAAAGTTTAGGGAAGTCCAAGCGCAATTCAGAGGAAAGGCGAATTGCATCACCAGATTAACGAATTCCGCTCTAGGCTATTCAGTATATGAAGTCGGAGAACAAGTTTCCAGGTCAATATTCAACATGTTTGTGGTTACTTACGACTCAGTTGCAGCCGAGGTAAAATGCCAATGCTTATTATTCGAGTCAAGAGGGATACTGTGCCGTCACGCACTAAGCGTGTTAAGCTTTGAACGAGTAAGTCAAGTGTCGCCGAGATATATACTGGAACGATGGAGCAAGAAG 1101 0.4169 MFFVIYISFSLCNSSFVFYLICCFLKSKFELVLKIMDDSSSDCQLNQGEVDYEFESNEVPEPLSVVDDQFVPKVRMTFTTLEDAGKFYRNYAKATGFSTRVRITNRKGNEIKNQLITCSREGKWKSKISPTEKTNPKAGLNCPPRIYIHTLKDVDAWIISKVVLDHSYPCCPSKAEMLKQHRELSMSIRCTIENNEEAGMRSTQRSESMHSFFNKFITRNSLLIQFVKQYDNCLGSREQAERESDAADFHTVIPCATKSSIEAQFQDVYTHQKFREVQAQFRGKANCITRLTNSALGYSVYEVGEQVSRSIFNMFVVTYDSVAAEVKCQCLLFESRGILCRHALSVLSFERVSQVSPRYILERWSKK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2995 367 ProSiteProfiles Zinc finger SWIM-type profile. 315 351 IPR007527 GO:0008270
Amo14g2995 367 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 183 IPR031052 GO:0006355
Amo14g2995 367 Pfam SWIM zinc finger 317 348 IPR007527 GO:0008270
Amo14g2995 367 PANTHER OS03G0843700 PROTEIN 57 183 - -
Amo14g2995 367 SMART 26again6 326 353 IPR006564 GO:0008270
Amo14g2995 367 PANTHER OS03G0843700 PROTEIN 201 366 - -
Amo14g2995 367 Pfam FAR1 DNA-binding domain 86 170 IPR004330 -
Amo14g2995 367 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 201 366 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2995 Amo-Chr14 127108295 127110849 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo14g2995 FAR1 9.4e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2995 - - adu:110278638 317.005