Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2987 ATGGGAATTGAGAGAAAGAAGAAGAGTAGTAATGGATCTGTGTGGTCTATTTTCATGCATGCGGATACCCAAGACTGGCTTCTAATGGGTTTTGGTGTGTTAGGGTCCATTGGTGAAGGTTCCACCACTCCTCTTGTGCTCTATCTCAGTAGCCTCATTATGAACAATATTGGGACTTCTTCTACCATCTCATCAACCACTTTTGTCCATTGCATCAACAAGAATGCAGTGGCTTGGTTATATTTGGCTGCTGGAACATTCCTTGTTTGCTTCCTCGAGGGTTATTGTTGGACAAGAACAAGTGAGAGACAAGCAGCAAGAATGAGAGCAAAGTACCTGAAAGCAGTGATGAGACAAGAAGTTGCATATTTTGATTTGAATGTGACAAGTACCTCAGACATTATCACTGGCGTTTCCAATGATAGCCTCCTCATTCAGGATGTTATTAGTGAGAAGGTACCAAATTTGTTGATGAACTTTTCATTGTTCATTGGGAGCTACATAGCTGGTTTTGCAATGCTATGGAGATTGGCCATAGTAGGGATCCCATTCACAGTTCTTCTTGTAATCCCTGGCTTCATTTATGGCAAGACATTAATGGGATTAGCAAAGAAAATGAGAGAAGAGTATAATAAAGCAGGTGCAATAGCTGAACAAGCAATATGTTCAATAAGAACAGTGTATTCATATGTGGGAGAAAATAAGACCATAAATGCATTCTCTAATGCTCTTCAAGGGTCACTGAGTTTGGGAATCAAACAAGGATTGGTCATGGACCATGGTGCTAAAGGAGGCACAGTTTTTTCAGCTGGAGCAGCTATCACTGTTGGTGGATTGGCACTAGGTGCTGGTTTAACCAACATGAAATACCTGAGCGAAGCAAGTTCAGCAGCGGAACGCATAAGGGAAGTCAATGAGAGAGTTCCGATGATCGATTCCGACGACAGTGACGGCGAAATCCTGGGAAGCGTTCGAGGGGAAGTAGAATTCCGAAACGTAGAGTTCGCGTACCCGACGAGACCAGAGACCCGGTTTTACGACCCTCTTGGTGGCGAAATAAGGTTTGATGGTGTTGCCATTGATAAGTTGCAGCTCAAGTGGTTCAGATCACAGATGGGGTTAGTGAGTCAAGAGCCCGTATTATTTGCCACCAGCATCAAAGAGAACATCCTGTTTGGGAAGGAGGATGCAACAGAGGCTGAGGTCATTGAGGCTGCAAAAGCTTCCAATGCTCATAATTTTATTTCCATGCTGCCTCAGGGTTATCAAACCCAGGTGGGTGAGAGAGGAACTCAAATGTCAGGTGGACAAAAGCAGAGGATTGCAATTGCTAGGGCCATAATTAAGAAGCCAAGAATGCTTCTTCTGGACGAAGCAACCAGTGCACTAGACTCCCACTCAGAGCGAATTGTCCAAAAAGCCCTCGAACAAGTGGCTGTTGGCTGCACCACCATCGTCGTCGCCCACCGCCTGTCCACGATTCGCAATGCCGACGTCATCGTTGCCATGCGAGCCGGAAAGGTGGTGGAGATGGGCACTCACGACGACCTCCTCTTGAATCATGATGGACTCTACTCCTCCATGGTTCGTCTCCAACAAACTGAGAATTCAGAAACAGATGAATCTGTAACTGCCCCAACAACTACTATTCATGTTCCTTCTTCTATGTCGGCTAGTGACACCGCTGATATTCACCACCTATGTTTAATTCATACAGATGATGATGACAACATTGAAAAGGTGGAAGAAGAGAAAGAGGAGAATAAGAACGCTCAGGCGACGGCATCGTTCTGGAGGCTGCTGGCACTGAACCTTCCGGAGTGGAAGCAAGCAGTTATGGGTTGCTTGAATGCGATGGTGTTCGGTGCAGTTCAACCGGTGTACACTTTGATTATGGGGTCGATGATGTTTGTGTATTTCGACAGCGATGATGAAGAGATGAGGAGGAAGACGAAGGAGTACTCGGTTTGCTTTGTGGGACTGTTTGTGTTGTCTTTGATTGTGAACATCGGGCAGCATTATAGCTTTGCATATATGGGAGAGTGCTTGACCAAAAGAATTAGAGAGACTATGTTTAAAAAGATACTCACCTTTGAAGTTTCCTGGTTTGATCTTTCTGAAAATTCTACCGGTGCTATTTGCTCTAGGCTTGCCAACGATGCAAATGTGGTGAGGTCTTTAGTGGGAGATAGGATTGGTTTGGTGGTGCAGACAGTGTCAGCGGTAGTAACAGCTTGGACTTTGGGTTTGGTCATTGCATGGAGACTGGCTATTGTTATGATATGTGTTCAACCCCTTATGATTGCATGCTTCTATACAAAACGTGTCCTTATCAAGACTATGTCAAAAAAGGTTGCAAAGGCGCAAGAAGAAAGTAGCAAGGTTGCCGCTGAAGCCGTTTCAAACCTAAGAACTATCACAGCCTTCTCTTCTCAAAACCGAATCCTCAAAATGCTCGAAAATGCACAAGAAGGACCAAGACGCGAGAATATCCGGCAATCATTTTACGCCGGAATCGGCCTTGCATGTTCCCAAGGCATAACATCATGTGTTTGGGCTCTCAACTATTGGTACGGTGGCAAGCTCGTCGCCGACGGTTACATCACCACAAAGGCATTGTTTCAAAGCTTCATGATTATTGTGAGTACAGCAAGAGTCATTGCCGACGCCGGCAGCATGACCTCGGACCTCGCAAAAGGCGCTGACGCCGTGTGCTCCATTTTCGCCGTCTTAGACCGGACCACCAAGATAGCGGCCGACGACGAAAATGGTCACAACCCGGAACATGTAACAGGACAAATACAACTCCATGATGTGCATTTTGCTTACCCCACTAGGCCAAACGTGACTATCTTCAAATCCTTTTCAATGAAAATAGAAGCTGGAAAGTCAACGGCATTGATAGGTCAAAGTGGATCCGGAAAGTCAACGATTATAGGGCTAATTGCAAGGTTCTATGATCCGCTAAGAGGGTACGTGACAATTGATAATAGAGATGTAAAGTCCTATAATTTGAAACAATTAAGGAGGCACATTGCACTTGTGAGCCAAGAACCTACGTTGTTCAATGGGAGCATAAGAGAGAACATTGCTTATGGATCTAATAACGGTGATGATGATAATGAAGTTGATGAGTCAGAGATCATAGAAGCGTCAAAATTAGCCATGGCACATGATTTTATTACCGGATTGAAGGACGGTTATGACACATGGTGTGGTGAGAAGGGGTTACAGCTTTCAGGGGGTCAAAAGCAAAGGATAGCGATTGCAAGGGCTATATTGAAAAATCCAAGAGTGTTGTTATTGGATGAGGCAACTAGTGCCCTTGATATTCAATCGGAGAAAGTTGTTCAGGAAGCACTAGAGAGGGCTATGGTGGAGAGGACTAGCGTGATCGTCGCACATAGGATGTGTACCATAAAGAAATGTGATCTTATTGCTGTGTTGGAGAAGGGCATGGTTGTGGAAAGTGGGACCCACTCTTCTTTGTTGGCAAAAGGAACTGCTGGAGCTTATTGCAACTTTGTTAGGCTTCAGACTGGAACTAACTAG 3552 0.4496 MGIERKKKSSNGSVWSIFMHADTQDWLLMGFGVLGSIGEGSTTPLVLYLSSLIMNNIGTSSTISSTTFVHCINKNAVAWLYLAAGTFLVCFLEGYCWTRTSERQAARMRAKYLKAVMRQEVAYFDLNVTSTSDIITGVSNDSLLIQDVISEKVPNLLMNFSLFIGSYIAGFAMLWRLAIVGIPFTVLLVIPGFIYGKTLMGLAKKMREEYNKAGAIAEQAICSIRTVYSYVGENKTINAFSNALQGSLSLGIKQGLVMDHGAKGGTVFSAGAAITVGGLALGAGLTNMKYLSEASSAAERIREVNERVPMIDSDDSDGEILGSVRGEVEFRNVEFAYPTRPETRFYDPLGGEIRFDGVAIDKLQLKWFRSQMGLVSQEPVLFATSIKENILFGKEDATEAEVIEAAKASNAHNFISMLPQGYQTQVGERGTQMSGGQKQRIAIARAIIKKPRMLLLDEATSALDSHSERIVQKALEQVAVGCTTIVVAHRLSTIRNADVIVAMRAGKVVEMGTHDDLLLNHDGLYSSMVRLQQTENSETDESVTAPTTTIHVPSSMSASDTADIHHLCLIHTDDDDNIEKVEEEKEENKNAQATASFWRLLALNLPEWKQAVMGCLNAMVFGAVQPVYTLIMGSMMFVYFDSDDEEMRRKTKEYSVCFVGLFVLSLIVNIGQHYSFAYMGECLTKRIRETMFKKILTFEVSWFDLSENSTGAICSRLANDANVVRSLVGDRIGLVVQTVSAVVTAWTLGLVIAWRLAIVMICVQPLMIACFYTKRVLIKTMSKKVAKAQEESSKVAAEAVSNLRTITAFSSQNRILKMLENAQEGPRRENIRQSFYAGIGLACSQGITSCVWALNYWYGGKLVADGYITTKALFQSFMIIVSTARVIADAGSMTSDLAKGADAVCSIFAVLDRTTKIAADDENGHNPEHVTGQIQLHDVHFAYPTRPNVTIFKSFSMKIEAGKSTALIGQSGSGKSTIIGLIARFYDPLRGYVTIDNRDVKSYNLKQLRRHIALVSQEPTLFNGSIRENIAYGSNNGDDDNEVDESEIIEASKLAMAHDFITGLKDGYDTWCGEKGLQLSGGQKQRIAIARAILKNPRVLLLDEATSALDIQSEKVVQEALERAMVERTSVIVAHRMCTIKKCDLIAVLEKGMVVESGTHSSLLAKGTAGAYCNFVRLQTGTN* 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2987 1183 SMART AAA_5 191 515 IPR003593 -
Amo14g2987 1183 SMART AAA_5 961 1159 IPR003593 -
Amo14g2987 1183 Pfam ABC transporter 344 461 IPR003439 GO:0005524
Amo14g2987 1183 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 19 257 IPR039421 -
Amo14g2987 1183 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 256 343 - -
Amo14g2987 1183 Gene3D ABC transporter type 1, transmembrane domain 576 922 IPR036640 GO:0005524|GO:0016021
Amo14g2987 1183 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 344 1181 IPR039421 -
Amo14g2987 1183 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 344 1181 - -
Amo14g2987 1183 Gene3D - 345 549 IPR027417 -
Amo14g2987 1183 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 618 899 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo14g2987 1183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 320 532 IPR027417 -
Amo14g2987 1183 SUPERFAMILY ABC transporter transmembrane region 23 312 IPR036640 GO:0005524|GO:0016021
Amo14g2987 1183 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 288 530 IPR003439 GO:0005524
Amo14g2987 1183 CDD ABC_6TM_Pgp_ABCB1_D1_like 29 301 - -
Amo14g2987 1183 CDD ABC_6TM_Pgp_ABCB1_D2_like 601 917 - -
Amo14g2987 1183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 923 1179 IPR027417 -
Amo14g2987 1183 ProSitePatterns ABC transporters family signature. 433 447 IPR017871 GO:0005524
Amo14g2987 1183 Pfam ABC transporter 953 1107 IPR003439 GO:0005524
Amo14g2987 1183 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 934 1176 IPR003439 GO:0005524
Amo14g2987 1183 CDD ABC_MTABC3_MDL1_MDL2 934 1179 - -
Amo14g2987 1183 Pfam ABC transporter transmembrane region 614 883 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo14g2987 1183 Pfam ABC transporter transmembrane region 30 282 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo14g2987 1183 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 256 343 IPR039421 -
Amo14g2987 1183 SUPERFAMILY ABC transporter transmembrane region 599 913 IPR036640 GO:0005524|GO:0016021
Amo14g2987 1183 ProSitePatterns ABC transporters family signature. 1079 1093 IPR017871 GO:0005524
Amo14g2987 1183 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 19 257 - -
Amo14g2987 1183 Gene3D - 924 1182 IPR027417 -
Amo14g2987 1183 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 31 257 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo14g2987 1183 Gene3D ABC transporter type 1, transmembrane domain 33 344 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2987 Amo-Chr14 126803089 126816410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2987 4 1183 Calmodulin-binding Proteins AT2G36910 38.656 0.0 885