Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2947 TCACTTTTTGGTTTGACAAATGTTGGAGACTTTGGTCCTTCTTTGTATGAGTGGTTAGGCATAGCTGAAGAAGATGCTTCGCTGGTCGAAAGGCGAGTAAAACATCCTCTTCCTTCTTTGCCTCCAGACGCAGTTATTCTAGAATCGTCTGGAATAGTTGCACATTCACAAAATCCAGCCATTTCCATAATCCCAACCAATAATTCTGATGTCGTCATTGCTAACAACAGCAACACCAATAACAGAGTTGGGCTTAAACGTTCAGCAAAATCTATTGTCAGTGGAAATGTAAATCTCCGAGGCGATGAACTAGATGACGAAAAAAATAATATTACAACTAGGTTGAAACTTCGAGAATCTACGATGGCATCGATTGCAGCTACCATGAATATGAATAATAAAAGGAATAAAAATAATCTTTCGAAATTTGCTTTCTTGACAAAAAGCGAATCTAAAAACCTTGAAGATGGATATAAATGGTGTAAGTATGGCGAAAAATCACTCAAAAAAAGCCCCTTCCAAAGGAGCTACTATCGTTGCACTACAATTGGTTGCAATGCGAAAAAGAGAGTGGAGAGGTGCCTGAATGACCCCACCCATGCACTAACTACCTATGAAGGTTTGCACACTCATAATTTGCCACCAATCCTCCCTCCTCCGTCAAGATCTTTTGGTCTCTACAACAACTCCACCCTTAGTTCCATACTTGGTAGAGGCAGAGTAGCACCTCAATATCATCATCATCGTTATCAACCAACATCTCTATAG 768 0.3997 SLFGLTNVGDFGPSLYEWLGIAEEDASLVERRVKHPLPSLPPDAVILESSGIVAHSQNPAISIIPTNNSDVVIANNSNTNNRVGLKRSAKSIVSGNVNLRGDELDDEKNNITTRLKLRESTMASIAATMNMNNKRNKNNLSKFAFLTKSESKNLEDGYKWCKYGEKSLKKSPFQRSYYRCTTIGCNAKKRVERCLNDPTHALTTYEGLHTHNLPPILPPPSRSFGLYNNSTLSSILGRGRVAPQYHHHRYQPTSL* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2947 255 Gene3D WRKY domain 139 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo14g2947 255 SUPERFAMILY WRKY DNA-binding domain 147 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo14g2947 255 ProSiteProfiles WRKY domain profile. 149 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g2947 255 SMART WRKY_cls 154 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g2947 255 Pfam WRKY DNA -binding domain 155 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo14g2947 255 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 68 223 IPR044810 GO:0003700
Amo14g2947 255 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 68 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2947 Amo-Chr14 125347940 125349345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2947 132 239 WRKY Transcription Factor Family AT2G47260 52.778 3.83e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo14g2947 WRKY 8.9e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2947 - - aip:107636875 476.863