Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2881 ATGAGACTGAAAGATAAAGTTATAGCAATTTCAAAGCACATGAAGACTGAAACTATTCCTAGAAAAAGGAGATCGCGCAGGAGACGCAGTGGAGGAAGTGATTCAGTAGAGAGTACTCTTGAGAAGTGGAAGGAGTACAATAAACAGCAACAACCAATGAGTGAAGGAGATGGGGTTGAAGTAATTCACAAGGTTCCTGCAAAGGGATCGAAAAAAGGGTGTATGAAAGGCAAAGGTGGACCACAGAATTATGATTGCAAGTTCAGGGGTGTGAGGCAGAGGATTTGGGGCAAATGGGTTGCAGAAATCCGCAAACCTGTCAATAGCAAGCGTGTTGCAAGGACCATGTATGGCCCTGGTGCTCGTTTGAACTTCCCTCAGCATCATGGCATAGAATTAATAGGTTCTAATGGATCATCTACTGGTCCATTATTTGATCAGAAATCACCAAGTGGAACCTATATAGATACTTTGAATGGTGGTGATGTTGCAAAAGTTGACGGGTTGGAGGGGAATCTTGATATGGGAATTCTTCAAGGGCCTTTTAAGTATGTAAAGGACGAAGTTGCTGGAGGAAGTGAAGGACTAGAAGGAGAGTTAGAGGAGGTTTTGAAAAACTCTGGTTTAGTTGAAGAGTGTAATAACTACATGCTAGAGGATTCTATGTGCATGGCTATGAATACAGGAGCTGATTATAACTCTTGTGATGCTACTAAACAGGGAATTATGGGGAAGAGTGAAGTGGAAAATTACAAATCCTGTAATGAGTTGAACTGCACAAACCATTGCTTTGGATACTTGCATAATATGATTCCAAACAGTAATCCTATGATACCAAACGGTAATCCAAAGTATGAGCAGTTCAGCAATCTCAAATCTAAGGCAGCTATTCCGACAAAAGATATGGAGGAAGTACTTGCAGAAATTCGGCAGTTTTGTAAGCAAGTGCTCCAAGGTGAGTAA 963 0.4123 MRLKDKVIAISKHMKTETIPRKRRSRRRRSGGSDSVESTLEKWKEYNKQQQPMSEGDGVEVIHKVPAKGSKKGCMKGKGGPQNYDCKFRGVRQRIWGKWVAEIRKPVNSKRVARTMYGPGARLNFPQHHGIELIGSNGSSTGPLFDQKSPSGTYIDTLNGGDVAKVDGLEGNLDMGILQGPFKYVKDEVAGGSEGLEGELEEVLKNSGLVEECNNYMLEDSMCMAMNTGADYNSCDATKQGIMGKSEVENYKSCNELNCTNHCFGYLHNMIPNSNPMIPNGNPKYEQFSNLKSKAAIPTKDMEEVLAEIRQFCKQVLQGE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2881 320 SMART rav1_2 87 132 IPR001471 GO:0003700|GO:0006355
Amo14g2881 320 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 22 138 - -
Amo14g2881 320 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 138 - -
Amo14g2881 320 SUPERFAMILY DNA-binding domain 87 127 IPR016177 GO:0003677
Amo14g2881 320 MobiDBLite consensus disorder prediction 15 56 - -
Amo14g2881 320 CDD AP2 86 128 IPR001471 GO:0003700|GO:0006355
Amo14g2881 320 Pfam AP2 domain 86 114 IPR001471 GO:0003700|GO:0006355
Amo14g2881 320 ProSiteProfiles AP2/ERF domain profile. 87 118 IPR001471 GO:0003700|GO:0006355
Amo14g2881 320 Gene3D AP2/ERF domain 86 114 IPR036955 GO:0003700|GO:0006355
Amo14g2881 320 MobiDBLite consensus disorder prediction 30 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2881 Amo-Chr14 123105842 123107773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2881 26 127 AP2-EREBP Transcription Factor Family AT2G40340 46.721 1.32e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2881 - - aip:107637982 507.679