Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2868 ATGTCATCACATTTGTTATGCCTTTTCTTTTTTCTCTTCACTTCAAACACTGTTGCCTCTGCCTTAGGAAATGAGAGTGACCACCTTGCACTGATCAAATTCAAAGAATCAATATCTAGTGACCCTTTTGGAGTGTTATCCACTTGGAACAGCTCAACCCACTTTTGCAACTGGCATGGAGTCAAATGTGGCAGCAAACATCAAAGAGTTCGGGAGCTGACTTTAGATTCATATAATTTGCAAGGGTCCATATCACCGTATGTTGGCAACCTTTCCTTTCTTAGAGTTTTGAGCCTTCAGCGCAATAACCTCCATGGTCATGTTCCGCAAACAATAAGCCGTTTGTTTCGACTGCGGGCACTTGCTTTAGCCATCAACAATTTAGTTGGTGAGTTCCCCATTGGCGTGACTAACTGTTCTAAATTGCAGAGATTGAAATTGACCTCCAATCATTTTGGAGGCAAAATACCAATGGAGATCGGGTCTCTTAGGAATCTTGAGAGATTTGATCTTGTTTCAAACAATTTTTTAGGACCAATCCCATTGTCAATGGGAAACCTGTCTTCTCTTGTTCTTCTTACTGTGGCTGATAATAATTTGGAGGGACATATACCTGACGAAATAGGCCATTTGAAGAACTTGGTGAATATTTCACTGTTTGAGGGTTCTCTTCCTAGCAACTTGTTCTCCAACCTCCCAAATCTCAAGATCATTGAACTGGATGGCAACCAATTTTCAGGTCCTATACCAACATCCATCACAACGGCATTTGGCCTTCAAGAAGTTGATTTTTCTATCAACAATTTTGTTGGACAAGTCCCAAATCTAGGAAGCCTTCAAAATCTTTTAGTTATAGAATTAGGAGAAATACCAGCTATCATAGGTGACCTAAGACAATTGTCTGAGCTAGATTTGGCATATAATATGTTGAACGGAAACATTCCTTCAGCCATTGGAAATTGCACGAGATTACAAATTCTAGATGTTTCATCTAACAACCTTAGTGGAATCATACCATCACAAGTATTTGAAATTCCATCTTTGTCAATCTTGTTGAACATTTCACACAACTCATTAAATGGTACTTTACCAAGTGAAGTAGGCCTGCTTAAAAGTATTATTGCACTAGATGTTTCCGAGAATCATCTATCTAATAAGATTCCGGAAGCAATTGGAGAATGTGAGAGTTTGGAGTACCTTTATTTGCAGGGGAATTCCTTTCATGGAATCATACCACCTTCTCTTGCTTCTCTAAAAGGTCTTCAAGAGTTAGACATTTCACGGAATCAGTTGTCCGGAACAATTCCACAAGAACTGCAGAACATTTCTGTTTTGGTATACTTCAATGCTTCTTTTAACATGTTAGAGGGTGAGGTACCAATGAACGGCGTGTTCCGAAACGCAACTGAAGTTTCATTGAGTGGCAATGGCAAGCTTTGTGGAGGGATCTCAAGCTTAAGGCTTCCACCGTGTCCTTCAAAAGCTACAAAAAAGAGAAAACATCATGGATTCAAGATTTGGATGATAGTTATCATAACATCTTCAGTTGTGTTTCTTCTTTTGCTTTCATCAATTCTTGCACTCGTTTCTAGAAGAAGAAGACAAAGAAAAGCATCTGTTGATTCAACAAATGAGAAAGTGCCCAGAGTATCATATCAGAACCTATATAATGCAACAAATGGGTTCTCAACAGAGAACTTAATAGGATCCGGTGGTTATGGCTCTGTGTATAAAGCAATACTTGATTCTGCAGAAGAAGTTGTTGCTGTAAAGGTTCTAAACCTTCAACTGAAAGGAGCCCACAAAAGTTTCACGGCTGAATGCAATGCTTTAAGAAATATCAGGCACAGAAATCTAGTGAAGATTGTAACATGTTGCTCTAGTGTGGATTACAAGGGAAATCATTTTAAGGCTCTGGTTTACGAGTACATCTCGAATGGAAGCTTAGACAAATGGTTGCATCCCAATAGAGAAAGTTCGAACCAACTAAGAATGTTAAACCTGCAGCAGAGATTAGAAGTTATTAGGGGCGTTGCTTCCGCAATGCATTATCTTCACTATGAATGTGAGCAGCCAGTAATTCATTGTGATTTGAAGCCGAGCAATGTCCTTCTTGGAGATAACATGGATGCTCAAGTGAGTGATTTCGGTTTAGCAAGACTTATCTCAGCAGTTGATGGCAACTCTCAGAACCAAACCAGCACCAGTGGAATCAAAGGAACAATAGGTTATGCTCCTCCAGAATATGGAACAAGTTCTCAAGTGTCAATAGAAGGTGACATATATAGCTTTGGCATTCTTGTTTTGGAGATGCTAACCGGGAAAAGACCAACAGAGGAAATGTTCAAAGATGGGTGTAGCCTCCACAACTATGCCCGTGATGCATGTCCAGATAATATCTTGGAGATTGTTGATGCAACTCTGCTGTCATTGATAGGTGAAGAAATTCAAACACCAACAGCTGCAGAAGAAAATAATCATATTGAGAATGCAGGACATTTGGAGAGTAATGTTGAGAACTGCTTATTCTCATTATTCAAGATTGGTCTTGCTTGTTCTGTGGACTCACCAAGAAAAAGGATGAATATGATGGAAGTCAATAGAGAACTCAACATTATCAAAAATAATTATGGATTACTTATGTGA 2646 0.3912 MSSHLLCLFFFLFTSNTVASALGNESDHLALIKFKESISSDPFGVLSTWNSSTHFCNWHGVKCGSKHQRVRELTLDSYNLQGSISPYVGNLSFLRVLSLQRNNLHGHVPQTISRLFRLRALALAINNLVGEFPIGVTNCSKLQRLKLTSNHFGGKIPMEIGSLRNLERFDLVSNNFLGPIPLSMGNLSSLVLLTVADNNLEGHIPDEIGHLKNLVNISLFEGSLPSNLFSNLPNLKIIELDGNQFSGPIPTSITTAFGLQEVDFSINNFVGQVPNLGSLQNLLVIELGEIPAIIGDLRQLSELDLAYNMLNGNIPSAIGNCTRLQILDVSSNNLSGIIPSQVFEIPSLSILLNISHNSLNGTLPSEVGLLKSIIALDVSENHLSNKIPEAIGECESLEYLYLQGNSFHGIIPPSLASLKGLQELDISRNQLSGTIPQELQNISVLVYFNASFNMLEGEVPMNGVFRNATEVSLSGNGKLCGGISSLRLPPCPSKATKKRKHHGFKIWMIVIITSSVVFLLLLSSILALVSRRRRQRKASVDSTNEKVPRVSYQNLYNATNGFSTENLIGSGGYGSVYKAILDSAEEVVAVKVLNLQLKGAHKSFTAECNALRNIRHRNLVKIVTCCSSVDYKGNHFKALVYEYISNGSLDKWLHPNRESSNQLRMLNLQQRLEVIRGVASAMHYLHYECEQPVIHCDLKPSNVLLGDNMDAQVSDFGLARLISAVDGNSQNQTSTSGIKGTIGYAPPEYGTSSQVSIEGDIYSFGILVLEMLTGKRPTEEMFKDGCSLHNYARDACPDNILEIVDATLLSLIGEEIQTPTAAEENNHIENAGHLESNVENCLFSLFKIGLACSVDSPRKRMNMMEVNRELNIIKNNYGLLM* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2868 881 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Amo14g2868 881 SUPERFAMILY L domain-like 223 481 - -
Amo14g2868 881 Gene3D Phosphorylase Kinase; domain 1 524 643 - -
Amo14g2868 881 Gene3D Transferase(Phosphotransferase) domain 1 644 878 - -
Amo14g2868 881 SMART serkin_6 562 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g2868 881 PANTHER LRR RECEPTOR-LIKE KINASE 288 878 - -
Amo14g2868 881 Gene3D Ribonuclease Inhibitor 26 137 IPR032675 -
Amo14g2868 881 ProSiteProfiles Protein kinase domain profile. 562 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g2868 881 SMART LRR_typ_2 232 259 IPR003591 -
Amo14g2868 881 SMART LRR_typ_2 297 321 IPR003591 -
Amo14g2868 881 SMART LRR_typ_2 370 394 IPR003591 -
Amo14g2868 881 SMART LRR_typ_2 187 211 IPR003591 -
Amo14g2868 881 SMART LRR_typ_2 91 115 IPR003591 -
Amo14g2868 881 SMART LRR_typ_2 418 441 IPR003591 -
Amo14g2868 881 PANTHER LRR RECEPTOR-LIKE KINASE 15 229 - -
Amo14g2868 881 PANTHER LRR RECEPTOR-LIKE KINASE 220 287 - -
Amo14g2868 881 PANTHER OS04G0122200 PROTEIN 15 229 - -
Amo14g2868 881 PANTHER OS04G0122200 PROTEIN 288 878 - -
Amo14g2868 881 PANTHER OS04G0122200 PROTEIN 220 287 - -
Amo14g2868 881 Pfam Protein kinase domain 563 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g2868 881 ProSitePatterns Protein kinases ATP-binding region signature. 568 591 IPR017441 GO:0005524
Amo14g2868 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Amo14g2868 881 SUPERFAMILY L domain-like 24 285 - -
Amo14g2868 881 Gene3D Ribonuclease Inhibitor 138 222 IPR032675 -
Amo14g2868 881 Gene3D Ribonuclease Inhibitor 223 500 IPR032675 -
Amo14g2868 881 Pfam Leucine rich repeat 396 455 IPR001611 GO:0005515
Amo14g2868 881 SUPERFAMILY Protein kinase-like (PK-like) 541 872 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2868 Amo-Chr14 122815364 122818615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2868 24 877 Receptor kinase-like Gene Family AT3G47570 38.861 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo14g2868 Pkinase 1.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2868 - - gmx:100797146 827.394