Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2855 ATGTTTGGTTTGTTTGGAAGTTGGAAAAGCTTCCATAAATTTGATGCTGCAAAGGATCCTGAGAGTGAGCTTTATAAGAAGTCCTTAGAAGTTACTGATAAGTTGGAATTATTTTGGTTCACCATGGATGATGAAAATTGTTCTTCTAATGTTGCAGTCTTGATTAACATGTTGTCCAGCATTGCACATGGAGATCCACAAAAATGGGCTTGGTCAGATGACTGGTGGTGGGGCATCCTCTACACCTTCAAAAATAAAGGAGTTGATATTTATGGGATTCTTCTTCTGAGAACTTTGATTGGAAAGATATTTGGCAGCATTGGATCAGTGAGAGGAGGCCTTGCTTTAGGTAAAGAGGGTCCTCTTGTCCATACTGGTGCTTGTATTGTTTCTTTGCTTGGACAAGTAATAGGAGTTGCTGCTGTATTTAGAGCTCCTGTTGGTGGTGTATTGTTTGCATTGGAAGAGGTGGAGGAGTTAACTTATATGGCATGTCTTCTTCACTTCTGCTATTGTTGTTGTTGTAGTACGAACTGCAATGGCATGGTGTAA 552 0.4004 MFGLFGSWKSFHKFDAAKDPESELYKKSLEVTDKLELFWFTMDDENCSSNVAVLINMLSSIAHGDPQKWAWSDDWWWGILYTFKNKGVDIYGILLLRTLIGKIFGSIGSVRGGLALGKEGPLVHTGACIVSLLGQVIGVAAVFRAPVGGVLFALEEVEELTYMACLLHFCYCCCCSTNCNGMV* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2855 183 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 138 177 - -
Amo14g2855 183 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 87 135 - -
Amo14g2855 183 Gene3D Clc chloride channel 80 182 - -
Amo14g2855 183 Pfam Voltage gated chloride channel 94 177 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Amo14g2855 183 SUPERFAMILY Clc chloride channel 91 176 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2855 Amo-Chr14 122107136 122109860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2855 86 157 Ion Channels AT5G26240 54.902 7.76e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2855 K05016 - adu:107484201 115.161