Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2799 ATGATGTTGATGATGATGAAGATGGTGGAAGAAGAAAGCCATGGATCAGAATGTTCTAAGACAAGAAGCCCTTGCAATGATGATAATAATAATGAAGATGATGGCTATTGTGAAGATGAGAGTGAAACCAATAATGAAGAAGAAGAAGAAGATGAGAGTAGTTATAAGAAACAATACAAGAACAACAATGGTGGTGGTGGAGGGTGTTCAAGCAACAGCACAGTGGAAGAGAATAACGAGAAGAAGAGTTCATCAACATCAGTAAGACCTTACGTTAGATCCAAGTTGCCAAGGTTGCGTTGGACCCCTGATCTTCATCTTCGATTTATTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACACCAAAATTGGTTCTTCAGTTGATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTACAGATGTACAGGAACAAAAAGGTAGAGGACACAAATCATCAAGTAGTAATGGCTGATCATCATAGATTTCTAATAGAAAATGGAGAGAGAAATAATGTTTATAATCTCAGCCAGCTTCCCATGCTTCAAAGCTATAGATATGGTCATGGATATGGAGTTGCTTCCGCTACTCTTGGTGTCTATGAAAACATGGCGCATAGGAACGCCAATTTGACTCATCATCATAGCATTTTTTCTCATAATTTTGGGGAACAATCATCAAGCCATCCTCATCATCATCATCATCATCATGAACAAAAAGATCATCAGTTTCTATCATTTGGAAATGGCCAAGGATCTTTATGCACGAATACTAATAACAATAGATTAATAAGCAGTCACATTGAAAAGCCTAGAGCTCAAGATTTCATGCCTACTAATACTAATAATAATTTGAAAAGAAAGGCTTCAGAAAATAGTGATATTGATTTGGACTTGTCTCTTAAATTAAATTCAAGGGTGGTTTTTAATGATGAGAAGCAATTAGGAAGAAGAAGCAGCATGATGATGATGGAGGAAGAAGAACACCATGAAGTTGTAGTTAATAGCAATCTATCACTCTCTTTGCACTCTCATCAATCCTCATCACCACAAGATCATTGTAATAAGGTGAAAGGGAAAAAGGCCACTACAAATTTGGATCTAAGAATCTGA 1128 0.3661 MMLMMMKMVEEESHGSECSKTRSPCNDDNNNEDDGYCEDESETNNEEEEEDESSYKKQYKNNNGGGGGCSSNSTVEENNEKKSSSTSVRPYVRSKLPRLRWTPDLHLRFIHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRNKKVEDTNHQVVMADHHRFLIENGERNNVYNLSQLPMLQSYRYGHGYGVASATLGVYENMAHRNANLTHHHSIFSHNFGEQSSSHPHHHHHHHEQKDHQFLSFGNGQGSLCTNTNNNRLISSHIEKPRAQDFMPTNTNNNLKRKASENSDIDLDLSLKLNSRVVFNDEKQLGRRSSMMMMEEEEHHEVVVNSNLSLSLHSHQSSSPQDHCNKVKGKKATTNLDLRI* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2799 375 MobiDBLite consensus disorder prediction 31 49 - -
Amo14g2799 375 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 13 210 IPR044848 GO:0003700
Amo14g2799 375 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 288 372 IPR044848 GO:0003700
Amo14g2799 375 MobiDBLite consensus disorder prediction 1 89 - -
Amo14g2799 375 SUPERFAMILY Homeodomain-like 96 151 IPR009057 -
Amo14g2799 375 Gene3D - 96 153 - -
Amo14g2799 375 Pfam Myb-like DNA-binding domain 99 149 IPR001005 -
Amo14g2799 375 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 97 152 IPR006447 GO:0003677
Amo14g2799 375 PANTHER - 288 372 - -
Amo14g2799 375 PANTHER - 13 210 - -
Amo14g2799 375 MobiDBLite consensus disorder prediction 347 375 - -
Amo14g2799 375 MobiDBLite consensus disorder prediction 58 89 - -
Amo14g2799 375 MobiDBLite consensus disorder prediction 359 375 - -
Amo14g2799 375 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 153 IPR017930 -
Amo14g2799 375 MobiDBLite consensus disorder prediction 225 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2799 Amo-Chr14 120789967 120792419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2799 67 171 G2-like Transcription Factor Family AT2G42660 54.545 8.59e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo14g2799 Myb_DNA-binding 8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2799 - - adu:107484994 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2799 14 120789967 120792419 Amo04g1775 04 82942444 82944209 hybridization