Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2750 ATGAATGTACCTTGGAAAACATCACCCACCTTGTCAGAACATGGTCTTGGGCCTCAGACCCCAAAAGAAAAGAAAAGAGCAGTTATGGGTTCCACTCGCTCAGATGCCTCTGCCAATGGCAAAGAACGCCTACGCTGGACACACGAACTCCATGATCGCTTTGTGCACGCTGTAAATAGGCTTGGGGGCCCTGATAGGGCAACACCAAAGGGTATATTGAAGGGGATGAAGGCCATGGGTGTTTCTGATCTCAGCATTTATCACGTCAAAAGTCACTTGCAGAAATACCGGATCTCCAAATTGATTCCAGAGTCTACCTCAAAAGGAAAGCTTGAGAAGAGAAGCATATCAAATACACTGCCAAATTTCAGTTCTACATGTGCTCTTCAGCTGAAGGAAATTCTTCAAATTCAGAGGGAGGTGCGAAACCGCTTGAGTGATCAAGCAGAGGTTCAGAGAAGGTTGAAGCAAAAAATTGAAGCACAAGACAAATACCTTGATAGAATTGGACAAAGCCATGAAAGCAGAACAACAATCACTAGAAAATCTTCCAAGCCATCATCATTTTGTGCTACAAACAATAATAATAAACATCTCCCTTCTCTCTCTGAGGAATCAGAATCTATTATTGAGACACACCCTGAAGTAGTAGTAGAAGAAGAGGAAGAGCATCAATCATGTTCCAAAAGACAAAGGGTAGTAATAGATGAGCATGTTTTTCCATCAAGCTTTGAACTTGAACTAGAATCATCCACCACCACAGAATTCATTGATCAATCATGGAATCTTTCATGGAGTCAACTTGCAGCTGCATGTGAATCACCTTTGATGCCAGGATTCTTATTATAA 849 0.4181 MNVPWKTSPTLSEHGLGPQTPKEKKRAVMGSTRSDASANGKERLRWTHELHDRFVHAVNRLGGPDRATPKGILKGMKAMGVSDLSIYHVKSHLQKYRISKLIPESTSKGKLEKRSISNTLPNFSSTCALQLKEILQIQREVRNRLSDQAEVQRRLKQKIEAQDKYLDRIGQSHESRTTITRKSSKPSSFCATNNNNKHLPSLSEESESIIETHPEVVVEEEEEHQSCSKRQRVVIDEHVFPSSFELELESSTTTEFIDQSWNLSWSQLAAACESPLMPGFLL* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2750 282 SUPERFAMILY Homeodomain-like 40 98 IPR009057 -
Amo14g2750 282 MobiDBLite consensus disorder prediction 1 15 - -
Amo14g2750 282 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 31 223 IPR044848 GO:0003700
Amo14g2750 282 Coils Coil 142 162 - -
Amo14g2750 282 Gene3D - 40 101 - -
Amo14g2750 282 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 41 99 IPR006447 GO:0003677
Amo14g2750 282 MobiDBLite consensus disorder prediction 1 43 - -
Amo14g2750 282 MobiDBLite consensus disorder prediction 172 206 - -
Amo14g2750 282 MobiDBLite consensus disorder prediction 181 206 - -
Amo14g2750 282 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 31 223 - -
Amo14g2750 282 Pfam Myb-like DNA-binding domain 44 97 IPR001005 -
Amo14g2750 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 101 IPR017930 -
Amo14g2750 282 Pfam MYB-CC type transfactor, LHEQLE motif 130 169 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2750 Amo-Chr14 117956309 117960845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2750 26 166 G2-like Transcription Factor Family AT4G28610 46.259 4.10e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo14g2750 Myb_DNA-binding 6.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2750 - - aip:107639556 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2750 14 117956309 117960845 Amo14g2750 14 117956309 117960845 ECH
Amo14g2750 14 117956309 117960845 Amo04g1686 04 80187219 80191123 hybridization