Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2748 ATGGTGGTTATTCAATTTGAACAGATTTTGAGTGATCCTCAGAAGCGTGCAGTTTATGATCAGTATGGTGAGGAGGGGCTGAAGGGGCAGGTACCACCACCAGGTGGTGGCAGTGACAGCAGTTCTGCGAATTTCCGGTTCAATCCCAGAAGTGCAGATGATATATTTTCGGAGTTCTTTGGTTTCTCCAGTTCATTTGGTGGAATGGGGGACATGGGTGGTCGCGCTGGCCCATCTAGCTTTTCCAGGGGCGGCATGTTTGGTGATGATATCTTTGCTCAGTTTAGGAGTGGAGCTGGAGAGGGCTCTGCCCATATGCCAAGGAAAAGTGCACCAATAGAGATAACATTGCTATGTAGCTTGGAGGATTTGTATAAAGGGACAACAAAAAAGATGAAGATTTCGAGGGATGTTATTGATGCCAATGGAAGGCCCACCAAAGTAGAGGAAATCCTTACAATTGAGATCAAACCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCAGCGAAGGGAAATGAGCAAAGAGGACATATCCCCGCAGACCTTGTGTTCATCATCGACGAGAAGCCGCATAGTGTCTTCAAGAGGGATGGCAATGATCTTGTTTTCACCCAGAAGGTATCCCTTGTAGAAGCTCTAACAGGTTACACGGTGCAGCTGACAACCCTTGATGGCCGAAACCTTACCATCCCCGTTAATTCAATCATTAGTCCGTCTTACGAAGAAGTCATTAAAGGAGAGGGCATGCCAATTCCTAAAGAACCCTCCAAGAAAGGTAACTTGCGAATCAAGTTCAACATCAAGTTCCCGTCCAGGCTTACATCCGAGCAGAAAAACGGCATTAAGCGATTATTGACATCATATTCGTCTACATGA 879 0.4562 MVVIQFEQILSDPQKRAVYDQYGEEGLKGQVPPPGGGSDSSSANFRFNPRSADDIFSEFFGFSSSFGGMGDMGGRAGPSSFSRGGMFGDDIFAQFRSGAGEGSAHMPRKSAPIEITLLCSLEDLYKGTTKKMKISRDVIDANGRPTKVEEILTIEIKPGWKKGTKITFPAKGNEQRGHIPADLVFIIDEKPHSVFKRDGNDLVFTQKVSLVEALTGYTVQLTTLDGRNLTIPVNSIISPSYEEVIKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKNGIKRLLTSYSST* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2748 292 Gene3D - 192 272 - -
Amo14g2748 292 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 8 288 - -
Amo14g2748 292 Gene3D DnaJ domain 5 73 IPR036869 -
Amo14g2748 292 SUPERFAMILY HSP40/DnaJ peptide-binding domain 194 280 IPR008971 GO:0006457|GO:0051082
Amo14g2748 292 MobiDBLite consensus disorder prediction 25 44 - -
Amo14g2748 292 SUPERFAMILY Chaperone J-domain 8 70 IPR036869 -
Amo14g2748 292 Gene3D - 112 190 - -
Amo14g2748 292 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 8 288 - -
Amo14g2748 292 SUPERFAMILY HSP40/DnaJ peptide-binding domain 113 192 IPR008971 GO:0006457|GO:0051082
Amo14g2748 292 Pfam DnaJ C terminal domain 113 271 IPR002939 -
Amo14g2748 292 CDD DnaJ_C 111 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2748 Amo-Chr14 117864781 117868430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2748 K09510 - nnu:104602593 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2748 14 117864781 117868430 Amo14g2748 14 117864781 117868430 ECH
Amo14g2748 14 117864781 117868430 Amo04g1683 04 80155298 80158704 hybridization
Amo14g2748 14 117864781 117868430 Amo12g2285 12 103278590 103282497 PCT
Amo14g2748 14 117864781 117868430 Amo02g2525 02 79067364 79071151 PCT
Amo12g2285 12 103278590 103282497 Amo14g2748 14 117864781 117868430 PCT
Amo02g2525 02 79067364 79071151 Amo14g2748 14 117864781 117868430 PCT