Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2690 ATGGAAGAGCCTGTCGTAGTTAACAAAGGCAAGGAGCCGCTGGATTTGCCACCAGGTTTCGGATTCCACCCAACAGATGAAGAAATCATCACTTATTACCTCACCGAGAAGGTCATGAACAGCAGCTTCAGTGCAACTGCCATAGGTGAAGCCGATTTGAACAAATCCGAACCCTGGGATTTACCAAAGAAAGCAAAGATGGGAGAGAAGGAGTGGTACTTCTTTTGTCAGAAAGGTTGCAGAATTGTGAGAAAAAATCTGCGATATTGCTCGGGACTCGAATGGAGTAGTTCCTGCGTCAGACTTTCCTTACAGTTGTCAGAAAATCTGGAAAATGATTAA 342 0.4444 MEEPVVVNKGKEPLDLPPGFGFHPTDEEIITYYLTEKVMNSSFSATAIGEADLNKSEPWDLPKKAKMGEKEWYFFCQKGCRIVRKNLRYCSGLEWSSSCVRLSLQLSENLEND* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2690 113 Coils Coil 103 113 - -
Amo14g2690 113 Pfam No apical meristem (NAM) protein 17 79 IPR003441 GO:0003677|GO:0006355
Amo14g2690 113 ProSiteProfiles NAC domain profile. 16 113 IPR003441 GO:0003677|GO:0006355
Amo14g2690 113 Gene3D NAC domain 25 98 IPR036093 GO:0003677|GO:0006355
Amo14g2690 113 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100-LIKE 3 79 - -
Amo14g2690 113 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 79 - -
Amo14g2690 113 SUPERFAMILY NAC domain 11 82 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2690 Amo-Chr14 115298443 115301619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2690 1 78 NAC Transcription Factor Family AT5G18270 75.949 3.35e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo14g2690 NAM 9.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2690 - - aip:107639226 237.654